RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 SLC35A1P78382 337 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 NAAAQ02083 359 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 LGALS3BPQ08380 585 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 NPRL3Q12980 569 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 GINS1Q14691 196 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 PNLIPRP3Q17RR3 467 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 RFX4Q33E94 735 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 C1QTNF12Q5T7M4 302 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 ACSM5Q6NUN0 579 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 FAM122CQ6P4D5 195 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 C5orf46Q6UWT4 87 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 RASSF6Q6ZTQ3 369 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 TUBA1AQ71U36 451 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 AAED1Q7RTV5 226 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 DHRSXQ8N5I4 330 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 PACRGLQ8N7B6 248 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 OR1K1Q8NGR3 316 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 OR13C2Q8NGS9 318 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 OR5J2Q8NH18 312 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 CYGBQ8WWM9 190 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 BCL2L2Q92843 193 aaPredicted RBP5.43□□□□□ -1.54
VIM-207ENST00000495528 TMEM45BQ96B21 275 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 ELMOD3Q96FG2 381 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 SLC38A2Q96QD8 506 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 DOK1Q99704 481 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 KATNB1Q9BVA0 655 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 TSSK6Q9BXA6 273 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 DGCR6LQ9BY27 220 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 GABARAPL1Q9H0R8 117 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 RAB1BQ9H0U4 201 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 CSTL1Q9H114 145 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 VCX3BQ9H321 246 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 RIBC2Q9H4K1 309 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 EGLN3Q9H6Z9 239 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 TAS2R5Q9NYW4 299 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 USE1Q9NZ43 259 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 POFUT2Q9Y2G5 429 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 LOC100130705A0A1B0GUX0 176 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 TMEM129A0AVI4 362 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 ARRDC5A6NEK1 342 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 DLGAP1O14490 977 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 RNF13O43567 381 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 UPK3AO75631 287 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 HPRP00739 348 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 MT-ATP6P00846 226 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 IGF2P01344 180 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 CRYAAP02489 173 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 SNRNP70P08621 437 aaKnown RBP5.42□□□□□ -1.54
VIM-207ENST00000495528 ASAH2BP0C7U1 165 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 CECR9P0C854 216 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 HLA-DOBP13765 273 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 SLC9A3P48764 834 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 P2RY4P51582 365 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 DVL1P1P54792 670 aaPredicted RBP5.42□□□□□ -1.54
VIM-207ENST00000495528 AQP4P55087 323 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 FXYD6P3P58550 94 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 ISL1P61371 349 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 ESRRGP62508 458 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 ERVK-25P63136 954 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 RELQ04864 619 aaPredicted RBP5.42□□□□□ -1.54
VIM-207ENST00000495528 C1DQ13901 141 aaKnown RBP5.42□□□□□ -1.54
VIM-207ENST00000495528 PTGES3Q15185 160 aaKnown RBP5.42□□□□□ -1.54
VIM-207ENST00000495528 SLC36A3Q495N2 470 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 CLEC12AQ5QGZ9 265 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 SMARCD3Q6STE5 483 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 PAQR6Q6TCH4 344 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 IZUMO2Q6UXV1 221 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 UNQ6126/PRO20091Q6UXV3 157 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 NANOGNBQ7Z5D8 188 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 ZNF786Q8N393 782 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 POMGNT2Q8NAT1 580 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 ZNF555Q8NEP9 628 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 OR6S1Q8NH40 331 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 SECTM1Q8WVN6 248 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 LIPHQ8WWY8 451 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 SGCDQ92629 289 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 MBOAT4Q96T53 435 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 KCNS3Q9BQ31 491 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 VCXQ9H320 206 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 OR52D1Q9H346 318 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 METTL17Q9H7H0 456 aaPredicted RBP5.42□□□□□ -1.54
VIM-207ENST00000495528 C8orf4Q9NR00 106 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 FAM118AQ9NWS6 357 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 SMPD3Q9NY59 655 aaPredicted RBP5.42□□□□□ -1.54
VIM-207ENST00000495528 MRPL39Q9NYK5 338 aaKnown RBP5.42□□□□□ -1.54
VIM-207ENST00000495528 IL20Q9NYY1 176 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 CRNNQ9UBG3 495 aaPredicted RBP5.42□□□□□ -1.54
VIM-207ENST00000495528 ZNF229Q9UJW7 825 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 ZNF346Q9UL40 294 aaKnown RBP5.42□□□□□ -1.54
VIM-207ENST00000495528 SIGLEC7Q9Y286 467 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 IER3IP1Q9Y5U9 82 aa5.42□□□□□ -1.54
VIM-207ENST00000495528 IGHV4OR15-8A0A075B7B6 117 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 ARPC4-TTLL3A0A0A6YYG9 625 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 TMEM89A2RUT3 159 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 KRTAP29-1A8MX34 341 aaPredicted RBP5.41□□□□□ -1.54
VIM-207ENST00000495528 PRAC2D3DTV9 90 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 PTGES3LE9PB15 166 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 H0YJX3 145 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 DOK2O60496 412 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 KRT33AO76009 404 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms