RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZNF788Q6ZQV5 615 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 FAM185AQ8N0U4 392 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 FAM86B1Q8N7N1 296 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 OR10Z1Q8NGY1 313 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 C17orf50Q8WW18 174 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 SGK3Q96BR1 496 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 GAFA1Q96PS6 74 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 RAB3IPQ96QF0 476 aaPredicted RBP11.61□□□□□ -0.55
VARS-228ENST00000495010 FUZQ9BT04 418 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 MEGF9Q9H1U4 602 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 MMP28Q9H239 520 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 EFCAB1Q9HAE3 211 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 COMMD3-BMI1R4GMX3 469 aa11.61□□□□□ -0.55
VARS-228ENST00000495010 TMEM210A6NLX4 147 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 GLCEO94923 617 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 AMY2BP19961 511 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 PAICSP22234 425 aaKnown RBP11.6□□□□□ -0.55
VARS-228ENST00000495010 GSK3AP49840 483 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 LGALS4P56470 323 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 CAV3P56539 151 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 DGUOKQ16854 277 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 RPL13AP3Q6NVV1 102 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 LYPD4Q6UWN0 246 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 FAM57BQ71RH2 274 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 NDUFA11Q86Y39 141 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 PAPD5Q8NDF8 572 aaKnown RBP11.6□□□□□ -0.55
VARS-228ENST00000495010 OR52H1Q8NGJ2 320 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 RPL3LQ92901 407 aaKnown RBP11.6□□□□□ -0.55
VARS-228ENST00000495010 MCUR1Q96AQ8 359 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 PHF21AQ96BD5 680 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 TLNRD1Q9H1K6 362 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 WDR13Q9H1Z4 485 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 OR10A2Q9H208 303 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 DCAF13Q9NV06 445 aaKnown RBP11.6□□□□□ -0.55
VARS-228ENST00000495010 RHBDD3Q9Y3P4 386 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 MPC1Q9Y5U8 109 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 V9GYQ6 96 aa11.6□□□□□ -0.55
VARS-228ENST00000495010 hCG_38984A0A1B0GV85 526 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 A0A1W2PPH5 198 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 SIGLEC5O15389 551 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 AKR7A2O43488 359 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 TFF1P04155 84 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 ACAA1P09110 424 aaPredicted RBP11.59□□□□□ -0.55
VARS-228ENST00000495010 CD28P10747 220 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 PSKH1P11801 424 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 GLRA1P23415 457 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 GSSP48637 474 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 NUDT2P50583 147 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 BMXP51813 675 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 CAPZA1P52907 286 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 TSPAN31Q12999 210 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 EIF2B1Q14232 305 aaKnown RBP11.59□□□□□ -0.55
VARS-228ENST00000495010 ARSJQ5FYB0 599 aaPredicted RBP11.59□□□□□ -0.55
VARS-228ENST00000495010 ZBTB37Q5TC79 503 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 ZNF511Q8NB15 262 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 TMEM185AQ8NFB2 350 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 OR6K6Q8NGW6 343 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 ANGPTL6Q8NI99 470 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 ZNRF4Q8WWF5 429 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 PGAM5Q96HS1 289 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 HIST1H2AAQ96QV6 131 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 EGLN3Q9H6Z9 239 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 PPP1R3EQ9H7J1 279 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 HEXA-AS1Q9H8Q6 139 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 ABCB9Q9NP78 766 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 BRD7Q9NPI1 651 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 DNAJC27Q9NZQ0 273 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 NLKQ9UBE8 527 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 CD300AQ9UGN4 299 aa11.59□□□□□ -0.55
VARS-228ENST00000495010 TRBV23-1A0A0A0MS06 115 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 DHRS12A0PJE2 317 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 OR2AT4A6NND4 320 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 ZNF850A8MQ14 1090 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 MPIG6BO95866 241 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 FAHP16930 419 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 CD33P20138 364 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 PRDX4Q13162 271 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 TEX30Q5JUR7 227 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 FOXB2Q5VYV0 432 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 CRIP3Q6Q6R5 217 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 HDXQ7Z353 690 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 TIGD4Q8IY51 512 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 SLC37A3Q8NCC5 494 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 PYURFQ96I23 114 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 RNF170Q96K19 258 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 RGCCQ9H4X1 137 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 ELL3Q9HB65 397 aaPredicted RBP11.58□□□□□ -0.56
VARS-228ENST00000495010 CDH10Q9Y6N8 788 aa11.58□□□□□ -0.56
VARS-228ENST00000495010 hCG_1809904A0A1W2PP81 198 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 A0A1W2PPE2 198 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 A0A1W2PR64 198 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 A0A1W2PRV1 198 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 CHST1O43916 411 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 GYPBP06028 91 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 PAX6P26367 422 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 RRM2P31350 389 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 BLVRAP53004 296 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 ZNF121P58317 390 aaPredicted RBP11.57□□□□□ -0.56
VARS-228ENST00000495010 PSME3P61289 254 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 MXRA7P84157 204 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms