RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 MED12LQ86YW9 2145 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 EXO5Q9H790 373 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 ELL3Q9HB65 397 aaPredicted RBP9.05□□□□□ -0.96
SAMM50-206ENST00000494795 RAB22AQ9UL26 194 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 BOKQ9UMX3 212 aaPredicted RBP9.05□□□□□ -0.96
SAMM50-206ENST00000494795 VSIG4Q9Y279 399 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 NOSIPQ9Y314 301 aaKnown RBP9.05□□□□□ -0.96
SAMM50-206ENST00000494795 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 A0A1B0GUH1 482 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 GJE1A6NN92 205 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 OR2AT4A6NND4 320 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 CCSO14618 274 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 DHRS3O75911 302 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 CFDP00746 253 aaPredicted RBP9.05□□□□□ -0.96
SAMM50-206ENST00000494795 SP1P08047 785 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 CSF1P09603 554 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 S100A1P23297 94 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 CCL11P51671 97 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 SCAND1P57086 179 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 PPIAP62937 165 aaKnown RBP9.05□□□□□ -0.96
SAMM50-206ENST00000494795 MRPS10P82664 201 aaKnown RBP9.05□□□□□ -0.96
SAMM50-206ENST00000494795 ARF1P84077 181 aaKnown RBP9.05□□□□□ -0.96
SAMM50-206ENST00000494795 ZNF626Q68DY1 528 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 SLC16A14Q7RTX9 510 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 FGD2Q7Z6J4 655 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 PIP4P1Q86T03 277 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 BPIFB2Q8N4F0 458 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 OR10R2Q8NGX6 335 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 REEP6Q96HR9 211 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 SF3B5Q9BWJ5 86 aaKnown RBP9.05□□□□□ -0.96
SAMM50-206ENST00000494795 SPRR3Q9UBC9 169 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 PRSS50Q9UI38 385 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 PCDHGA1Q9Y5H4 931 aa9.05□□□□□ -0.96
SAMM50-206ENST00000494795 ANKRD11Q6UB99 2663 aaPredicted RBP9.04□□□□□ -0.96
SAMM50-206ENST00000494795 OR14I1A6ND48 311 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 ZNF736B4DX44 427 aaPredicted RBP9.04□□□□□ -0.96
SAMM50-206ENST00000494795 KCNAB3O43448 404 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 MPC2O95563 127 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 ZNF708P17019 499 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 CTSSP25774 331 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 HLXQ14774 488 aaPredicted RBP9.04□□□□□ -0.96
SAMM50-206ENST00000494795 RBMS2Q15434 407 aaKnown RBP9.04□□□□□ -0.96
SAMM50-206ENST00000494795 PABPC1L2AQ5JQF8 200 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 ATPAF1Q5TC12 328 aaPredicted RBP9.04□□□□□ -0.96
SAMM50-206ENST00000494795 ADAD2Q8NCV1 583 aaKnown RBP9.04□□□□□ -0.96
SAMM50-206ENST00000494795 MDS2Q8NDY4 140 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 OR1F12Q8NHA8 337 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 OR2H1Q9GZK4 316 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 HEXA-AS1Q9H8Q6 139 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 EIF3KQ9UBQ5 218 aaKnown RBP9.04□□□□□ -0.96
SAMM50-206ENST00000494795 CEP295Q9C0D2 2601 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 HPNP05981 417 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 DNASE1P24855 282 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 PTGFRP43088 359 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 TCF15Q12870 199 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 BAMBIQ13145 260 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 AIMP2Q13155 320 aaKnown RBP9.04□□□□□ -0.96
SAMM50-206ENST00000494795 LIX1LQ8IVB5 337 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 FDCSPQ8NFU4 85 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 TNFAIP8L1Q8WVP5 186 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 HS3ST6Q96QI5 342 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 CDC6Q99741 560 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 ZNF552Q9H707 407 aaPredicted RBP9.04□□□□□ -0.96
SAMM50-206ENST00000494795 V9GYS6 101 aa9.04□□□□□ -0.96
SAMM50-206ENST00000494795 SDCBPO00560 298 aaPredicted RBP9.03□□□□□ -0.96
SAMM50-206ENST00000494795 GOSR2O14653 212 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 MRPL33O75394 65 aaKnown RBP9.03□□□□□ -0.96
SAMM50-206ENST00000494795 BPNT1O95861 308 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 CYB5AP00167 134 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 NGFP01138 241 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 MMP7P09237 267 aaPredicted RBP9.03□□□□□ -0.96
SAMM50-206ENST00000494795 FOSL1P15407 271 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 C4orf46Q504U0 113 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 RHOUQ7L0Q8 258 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 C6orf201Q7Z4U5 140 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 MEIOBQ8N635 442 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 THRSPQ92748 146 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 CPNE4Q96A23 557 aaPredicted RBP9.03□□□□□ -0.96
SAMM50-206ENST00000494795 MOB1AQ9H8S9 216 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 IGKV1-12A0A0C4DH73 117 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 FAM221AA4D161 298 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 NAP1L6A6NFF2 107 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 NOS1APO75052 506 aaPredicted RBP9.03□□□□□ -0.96
SAMM50-206ENST00000494795 IGKV1D-12P01611 117 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 ZNF35P13682 527 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 GABRR1P24046 479 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 HTR2BP41595 481 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 CXADRP78310 365 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 TSC22D1Q15714 1073 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 UQCC2Q9BRT2 126 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 TMEM59Q9BXS4 323 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 OR6C6A6NF89 314 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 TM4SF5O14894 197 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 LILRA1O75019 489 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 CXCL2P19875 107 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 ZNF81P51508 661 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 RAG2P55895 527 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 MICBQ29980 383 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 HIKESHIQ53FT3 197 aa9.03□□□□□ -0.96
SAMM50-206ENST00000494795 METTL11BQ5VVY1 283 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms