RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PPIAL4FP0DN26 164 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 VPREB1P12018 145 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ACADSP16219 412 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF12P17014 697 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 GPX2P18283 190 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 FUT1P19526 365 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 LAP3P28838 519 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 AQP2P41181 271 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 GDI2P50395 445 aaKnown RBP4.28□□□□□ -1.72
PTCD3-219ENST00000494323 UGT2B15P54855 530 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 SEC61BP60468 96 aaKnown RBP4.28□□□□□ -1.72
PTCD3-219ENST00000494323 PPP1CBP62140 327 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 PAX8Q06710 450 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 FMODQ06828 376 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 RPL18Q07020 188 aaKnown RBP4.28□□□□□ -1.72
PTCD3-219ENST00000494323 SLC3A1Q07837 685 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 PSG7Q13046 419 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 GAGE1Q13065 139 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 GAGE4Q13068 117 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ZMYND11Q15326 602 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 NPTX1Q15818 432 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 SNAPC1Q16533 368 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 HIST3H3Q16695 136 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF774Q6NX45 483 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF613Q6PF04 617 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 Q6ZR03 302 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 MSANTD1Q6ZTZ1 278 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 DPPA2Q7Z7J5 298 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 LRRC28Q86X40 367 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-219ENST00000494323 CLDN22Q8N7P3 220 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 TSPAN14Q8NG11 270 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 OR2Z1Q8NG97 314 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 GPR32P1Q8NGA4 272 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 OR4D11Q8NGI4 311 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 MOSPD2Q8NHP6 518 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ADAMTS16Q8TE57 1224 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 C4orf45Q96LM5 186 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 CCT8L2Q96SF2 557 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ARHGDIGQ99819 225 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 MRPL13Q9BYD1 178 aaKnown RBP4.28□□□□□ -1.72
PTCD3-219ENST00000494323 SLITRK2Q9H156 845 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 C1orf198Q9H425 327 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 MEPEQ9NQ76 525 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-219ENST00000494323 TMEM106BQ9NUM4 274 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 CHCHD3Q9NX63 227 aaKnown RBP4.28□□□□□ -1.72
PTCD3-219ENST00000494323 C1RLQ9NZP8 487 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF229Q9UJW7 825 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ANGPT4Q9Y264 503 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 UGT2A1Q9Y4X1 527 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 NOTCH3Q9UM47 2321 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 TMEM120BA0PK00 339 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 TRAPPC13A5PLN9 417 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 EVPLLA8MZ36 301 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 CLDN34H7C241 214 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 CHP2O43745 196 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 TIMM8AO60220 97 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-219ENST00000494323 SHOX2O60902 331 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-219ENST00000494323 CRYBA1P05813 215 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 PRSS2P07478 247 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 WNT2P09544 360 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 THRBP10828 461 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 NPY4RP50391 375 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 BRWD1-AS2P59051 145 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 KRTAP10-3P60369 221 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 BTG1P62324 171 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 CD47Q08722 323 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 SELPLGQ14242 412 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 DEFB112Q30KQ8 113 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 AGKQ53H12 422 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 TNFAIP8L3Q5GJ75 292 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 FAM27BQ5VT28 67 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 OTPQ5XKR4 325 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 C1orf94Q6P1W5 598 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 SLC25A47Q6Q0C1 308 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 FIP1L1Q6UN15 594 aaKnown RBP4.27□□□□□ -1.73
PTCD3-219ENST00000494323 EPGNQ6UW88 154 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 DLEU7Q6UYE1 221 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 BRD3OSQ6XYD6 125 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 C17orf107Q6ZR85 190 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 RFPL4BQ6ZWI9 263 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 NANOGNBQ7Z5D8 188 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 CENPVQ7Z7K6 275 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-219ENST00000494323 PTOV1Q86YD1 416 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 NKAIN4Q8IVV8 208 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 OR8H3Q8N146 312 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 PARP8Q8N3A8 854 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 SPICQ8N5J4 248 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 PFN4Q8NHR9 129 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 ZNF420Q8TAQ5 688 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-219ENST00000494323 TMEM255BQ8WV15 326 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 ITLN1Q8WWA0 313 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 NABP1Q96AH0 204 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 CMBLQ96DG6 245 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 SPDL1Q96EA4 605 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 SAMD8Q96LT4 415 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 RBP7Q96R05 134 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 PKP2Q99959 881 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 PRSS27Q9BQR3 290 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 EBF4Q9BQW3 602 aa4.27□□□□□ -1.73
PTCD3-219ENST00000494323 PARD6BQ9BYG5 372 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms