RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 SUMO3P55854 103 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-222ENST00000493919 OR10A3P58181 314 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 PTGES3Q15185 160 aaKnown RBP10.28□□□□□ -0.76
BRCA1-222ENST00000493919 ELAVL1Q15717 326 aaKnown RBP10.28□□□□□ -0.76
BRCA1-222ENST00000493919 EXT1Q16394 746 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 HYAL4Q2M3T9 481 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 KHDC3LQ587J8 217 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 PLAG1Q6DJT9 500 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 SLC48A1Q6P1K1 146 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 SMARCD3Q6STE5 483 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 TMEM156Q8N614 296 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 OR4D5Q8NGN0 318 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 PIGXQ8TBF5 258 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 BRIX1Q8TDN6 353 aaKnown RBP10.28□□□□□ -0.76
BRCA1-222ENST00000493919 DOK4Q8TEW6 326 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 FAM46BQ96A09 425 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 AKR1E2Q96JD6 320 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF350Q9GZX5 532 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 GEMIN7Q9H840 131 aaKnown RBP10.28□□□□□ -0.76
BRCA1-222ENST00000493919 UBQLN4Q9NRR5 601 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 PLEKHJ1Q9NW61 149 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 PTGFRNQ9P2B2 879 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 TNRC6AQ8NDV7 1962 aaKnown RBP10.27□□□□□ -0.76
BRCA1-222ENST00000493919 NPIPA5A0A0B4J1W7 369 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 OR6C76A6NM76 312 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 NPIPA5E9PKD4 350 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 NPIPA3F8WFD2 350 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 K7EQM0 130 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 GOSR2O14653 212 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 BCKDKO14874 412 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 MMP23AO75900 390 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 PRSS23O95084 383 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 LRATO95237 230 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 GPR75O95800 540 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 HPRT1P00492 218 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 SERPINA7P05543 415 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 ANXA2P07355 339 aaKnown RBP10.27□□□□□ -0.76
BRCA1-222ENST00000493919 SLC2A2P11168 524 aaPredicted RBP10.27□□□□□ -0.76
BRCA1-222ENST00000493919 TACR1P25103 407 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 PTGER1P34995 402 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 RAB9AP51151 201 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 KIAA0040Q15053 153 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF750Q32MQ0 723 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 TMEM255AQ5JRV8 349 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 C1orf194Q5T5A4 169 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 IDNKQ5T6J7 187 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 SLC22A10Q63ZE4 541 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF660Q6AZW8 331 aaPredicted RBP10.27□□□□□ -0.76
BRCA1-222ENST00000493919 TMUB2Q71RG4 321 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 GABRG1Q8N1C3 465 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 TMEM186Q96B77 213 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 PINX1Q96BK5 328 aaKnown RBP10.27□□□□□ -0.76
BRCA1-222ENST00000493919 REEP6Q96HR9 211 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 IMMP1LQ96LU5 166 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF607Q96SK3 696 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 PIMREGQ9BSJ6 248 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 OR8D2Q9GZM6 311 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 TMEM160Q9NX00 188 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 NPIPA1Q9UND3 350 aa10.27□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF705EA8MWA4 302 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-222ENST00000493919 G3V3Q6 166 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 K7EM74 188 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 CASKO14936 926 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 IL18BPO95998 194 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 CST2P09228 141 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 GIPP09681 153 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-222ENST00000493919 ACKR3P25106 362 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 RPL4P36578 427 aaKnown RBP10.27□□□□□ -0.77
BRCA1-222ENST00000493919 INPP1P49441 399 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 TNFSF10P50591 281 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 RAP2BP61225 183 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 IGLV3-21P80748 117 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-222ENST00000493919 PLAURQ03405 335 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 AESQ08117 197 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 C6orf136Q5SQH8 315 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 FAM169BQ8N8A8 192 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 SAMD12Q8N8I0 201 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 B3GNT7Q8NFL0 401 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 RAB40AQ8WXH6 277 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 DAZLQ92904 295 aaKnown RBP10.27□□□□□ -0.77
BRCA1-222ENST00000493919 HARBI1Q96MB7 349 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 BBC3Q96PG8 261 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-222ENST00000493919 SSBP4Q9BWG4 385 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-222ENST00000493919 OR2J1Q9GZK6 312 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 EXOSC3Q9NQT5 275 aaKnown RBP10.27□□□□□ -0.77
BRCA1-222ENST00000493919 AURKAIP1Q9NWT8 199 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-222ENST00000493919 DOK5Q9P104 306 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 ZNF780BQ9Y6R6 833 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 SPTA1P02549 2419 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 DOCK10Q96BY6 2186 aa10.27□□□□□ -0.77
BRCA1-222ENST00000493919 A8MVM7 634 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 CEACAM4O75871 244 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 KNG1P01042 644 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 BCKDHAP12694 445 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 CPMP14384 443 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 DRD2P14416 443 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 ID1P41134 155 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 ATP5J2P56134 94 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 FAM3AP98173 230 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms