RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 MRPL24Q96A35 216 aaKnown RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 SNX22Q96L94 193 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 FOXQ1Q9C009 403 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 LPAR5Q9H1C0 372 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 LYRM4Q9HD34 91 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 Q9N2J8 555 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 CENPMQ9NSP4 180 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 R4GMQ9 66 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 C17orf51A8MQB3 221 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 MKRN2OSH3BPM6 223 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 WISP1O95388 367 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 RNH1P13489 461 aaKnown RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 MDKP21741 143 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 BCKDHBP21953 392 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 RBMXP38159 391 aaKnown RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 RAB4BP61018 213 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 NHLH2Q02577 135 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 OR52N5Q8NH56 324 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 HOXB13Q92826 284 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 ARV1Q9H2C2 271 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 EHFQ9NZC4 300 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 TBC1D29Q9UFV1 150 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 COA3Q9Y2R0 106 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 C9J4A7 227 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 ADAM10O14672 748 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 PQBP1O60828 265 aaKnown RBP10.35□□□□□ -0.75
HDAC4-210ENST00000493582 SRSF10O75494 262 aaKnown RBP10.35□□□□□ -0.75
HDAC4-210ENST00000493582 KAT7O95251 611 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 BPNT1O95861 308 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 SLC35E2P0CK97 266 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 PGA4P0DJD7 388 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 PGA5P0DJD9 388 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 AFF3P51826 1226 aaKnown RBP10.35□□□□□ -0.75
HDAC4-210ENST00000493582 TNFRSF9Q07011 255 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 ERV3-1Q14264 604 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 DCXRQ7Z4W1 244 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 CA13Q8N1Q1 262 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 SLC22A24Q8N4F4 322 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 M1APQ8TC57 530 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 ARHGAP5-AS1Q96IT6 56 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 SLC25A31Q9H0C2 315 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 KCNIP3Q9Y2W7 256 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 BORCS7-ASMTA0A0B4J1R7 106 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 RBFOX3A6NFN3 312 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 OTOL1A6NHN0 477 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-210ENST00000493582 FIGNL2A6NMB9 653 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 ZNF705GA8MUZ8 300 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-210ENST00000493582 CDRT15L2A8MXV6 281 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 HSD17B6O14756 317 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 OR5H8P0DN80 308 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 GZMBP10144 247 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 HPGDP15428 266 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 LMO1P25800 156 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 CSNK2A1P68400 391 aaPredicted RBP10.35□□□□□ -0.75
HDAC4-210ENST00000493582 HIKESHIQ53FT3 197 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 CDCP2Q5VXM1 449 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 FIGLAQ6QHK4 219 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 ZNF429Q86V71 674 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 LHFPL1Q86WI0 220 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 CSNK2A3Q8NEV1 391 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 SCGB3A2Q96PL1 93 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 NDUFAF3Q9BU61 184 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.35□□□□□ -0.75
HDAC4-210ENST00000493582 C1orf123Q9NWV4 160 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 OSGIN2Q9Y236 505 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 KNL1Q8NG31 2342 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 THSD7BQ9C0I4 1608 aa10.35□□□□□ -0.75
HDAC4-210ENST00000493582 IGLV1-36A0A0B4J1U3 117 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 SYT7O43581 403 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 MBPP02686 304 aaPredicted RBP10.34□□□□□ -0.75
HDAC4-210ENST00000493582 GLI4P10075 376 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 HIST1H1DP16402 221 aaKnown RBP10.34□□□□□ -0.75
HDAC4-210ENST00000493582 HOXA6P31267 233 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 ZNF93P35789 620 aaPredicted RBP10.34□□□□□ -0.75
HDAC4-210ENST00000493582 WASP42768 502 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 CD81P60033 236 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 RND3P61587 244 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 DNLZQ5SXM8 178 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 GLIPR1L1Q6UWM5 242 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 RD3Q7Z3Z2 195 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 LRRC18Q8N456 261 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 FAM3CQ92520 227 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 GINS3Q9BRX5 216 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 TIMM29Q9BSF4 260 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 PHPT1Q9NRX4 125 aaPredicted RBP10.34□□□□□ -0.75
HDAC4-210ENST00000493582 OR14J1Q9UGF5 321 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 SERGEFQ9UGK8 458 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 B3GALT5Q9Y2C3 310 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 NOTCH4Q99466 2003 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 TMEM14DPA8MWL7 114 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 TGFBR3LH3BV60 316 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 LILRB3O75022 631 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 HSD11B1P28845 292 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 DRD3P35462 400 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 P2RY1P47900 373 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 NUBP1P53384 320 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 ACY1Q03154 408 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 LILRA6Q6PI73 481 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 REEP6Q96HR9 211 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 THOC3Q96J01 351 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms