RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 H2BFMP0C1H6 154 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 DBTP11182 482 aaKnown RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 CCL1P22362 96 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 CFHR2P36980 270 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 NAA10P41227 235 aaPredicted RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 ALDH3B1P43353 468 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 CX3CR1P49238 355 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 CCR9P51686 369 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 PRKXP51817 358 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ZNF121P58317 390 aaPredicted RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 RPS7P62081 194 aaKnown RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 ZNF91Q05481 1191 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 LOXL1Q08397 574 aaPredicted RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 HLXQ14774 488 aaPredicted RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 LRRC36Q1X8D7 754 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 CLEC12BQ2HXU8 276 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ZNF181Q2M3W8 571 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 KLHL22Q53GT1 634 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 GLYATL3Q5SZD4 288 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 RNLSQ5VYX0 342 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ZNF322Q6U7Q0 402 aaPredicted RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 LRRN1Q6UXK5 716 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 PGAP1Q75T13 922 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 SSX6Q7RTT6 188 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 ELMOD2Q8IZ81 293 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ZCCHC24Q8N2G6 241 aaKnown RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 SYS1Q8N2H4 156 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ACBD7Q8N6N7 88 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ZNF485Q8NCK3 441 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 MAPK1IP1LQ8NDC0 245 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 SETD9Q8NE22 299 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 CCDC54Q8NEL0 328 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ZNF555Q8NEP9 628 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 OR51G2Q8NGK0 314 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 OR13G1Q8NGZ3 307 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 HAVCR2Q8TDQ0 301 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 RDH5Q92781 318 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ERGIC1Q969X5 290 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 OTULINQ96BN8 352 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 LGALS12Q96DT0 336 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 PERPQ96FX8 193 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 LYZL4Q96KX0 146 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 MYCBPQ99417 103 aaPredicted RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 FKBP14Q9NWM8 211 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 CNOT2Q9NZN8 540 aaKnown RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 DNAJC27Q9NZQ0 273 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 MRPL15Q9P015 296 aaKnown RBP5.69□□□□□ -1.5
VPS52-219ENST00000493379 A0A1B0GTI1 187 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 TMEM269A0A1B0GVZ9 245 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 IFNL4K9M1U5 179 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 MLNRO43193 412 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 FAM20BO75063 409 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 NCR1O76036 304 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 CLIC3O95833 236 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 FADS2O95864 444 aaKnown RBP5.68□□□□□ -1.5
VPS52-219ENST00000493379 CST4P01036 141 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 TTRP02766 147 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 ISG15P05161 165 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 ERCC1P07992 297 aaPredicted RBP5.68□□□□□ -1.5
VPS52-219ENST00000493379 GNAO1P09471 354 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 PIPP12273 146 aaPredicted RBP5.68□□□□□ -1.5
VPS52-219ENST00000493379 SLC25A16P16260 332 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 ACHEP22303 614 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 CPT2P23786 658 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 COL8A2P25067 703 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 DCKP27707 260 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 HSD11B1P28845 292 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 CD200P41217 278 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 PDLIM4P50479 330 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 ZNF81P51508 661 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 RIDAP52758 137 aaKnown RBP5.68□□□□□ -1.5
VPS52-219ENST00000493379 ACTC1P68032 377 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 ACTA1P68133 377 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 MAB21L1Q13394 359 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 TAF13Q15543 124 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 SNCBQ16143 134 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 SPATA46Q5T0L3 261 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 LIPNQ5VXI9 398 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 TMEM42Q69YG0 159 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 OR2T2Q6IF00 324 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 PLEKHG7Q6ZR37 379 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 KRT77Q7Z794 578 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 RFLNBQ8N5W9 214 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 ZNF283Q8N7M2 679 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 SPERTQ8NA61 448 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 ZNF540Q8NDQ6 660 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 OR8B12Q8NGG6 310 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 Q8TCH9 128 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 RPS4Y2Q8TD47 263 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 CYGBQ8WWM9 190 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 RORBQ92753 470 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 RNFT2Q96EX2 444 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 SIGLEC11Q96RL6 698 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 VRK1Q99986 396 aaPredicted RBP5.68□□□□□ -1.5
VPS52-219ENST00000493379 RHNO1Q9BSD3 238 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 ANKRD60Q9BZ19 345 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 OR10A2Q9H208 303 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 VCXQ9H320 206 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms