RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	LHFPL4	Q7Z7J7	247 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	ADCK1	Q86TW2	530 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	FAM90A1	Q86YD7	464 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF695	Q8IW36	515 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	DYNAP	Q8N1N2	210 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	OSR2	Q8N2R0	312 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	LINC00471	Q8N535	108 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	CLDN22	Q8N7P3	220 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	OR5D13	Q8NGL4	314 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	OR4C15	Q8NGM1	316 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	TMEM255B	Q8WV15	326 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	SPTSSA	Q969W0	71 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	ST6GALNAC6	Q969X2	333 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	RNF166	Q96A37	237 aa	Predicted RBP	4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	TAMM41	Q96BW9	452 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	RASD2	Q96D21	266 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	PRRC1	Q96M27	445 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF570	Q96NI8	536 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	CCL13	Q99616	98 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	ATF6B	Q99941	703 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	FAM110A	Q9BQ89	295 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	OR2H1	Q9GZK4	316 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	WNT5B	Q9H1J7	359 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	RETN	Q9HD89	108 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	MED4	Q9NPJ6	270 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	ZFP57	Q9NU63	452 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	TMEM100	Q9NV29	134 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	KAAG1	Q9UBP8	84 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	GLS2	Q9UI32	602 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	PRPF19	Q9UMS4	504 aa	Known RBP	4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	IGLV1-36	A0A0B4J1U3	117 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602		A0A1W2PRQ8	180 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	PRSS37	A4D1T9	235 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	SH2D7	A6NKC9	451 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	CXCR6	O00574	342 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	NDUFB3	O43676	98 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	DOK2	O60496	412 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	KRT36	O76013	467 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC2A10	O95528	541 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	SERPINA1	P01009	418 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	RAC2	P15153	192 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	POU1F1	P28069	291 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	SDHA	P31040	664 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	GRK5	P34947	590 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC15A1	P46059	708 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	INSL3	P51460	131 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	BLVRA	P53004	296 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	CRYBA2	P53672	197 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	TPTE	P56180	551 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	ELF3	P78545	371 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	AQP6	Q13520	282 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	DGCR6	Q14129	220 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	SSX2	Q16385	188 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	SPATS1	Q496A3	300 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	ABCA11P	Q4W5N1	156 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	KIAA2026	Q5HYC2	2103 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	C9orf152	Q5JTZ5	239 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	ARMC4	Q5T2S8	1044 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	LGALS9C	Q6DKI2	356 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	RPL13AP3	Q6NVV1	102 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	SMARCD3	Q6STE5	483 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	LCNL1	Q6ZST4	164 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	TMPRSS11F	Q6ZWK6	438 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	NKAIN4	Q8IVV8	208 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	NRM	Q8IXM6	262 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	FTMT	Q8N4E7	242 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	FAM216B	Q8N7L0	139 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	CELF2-AS1	Q8N7Q2	184 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	OR52L1	Q8NGH7	329 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	OR1F12	Q8NHA8	337 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	MOSPD2	Q8NHP6	518 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	PFN4	Q8NHR9	129 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	NABP1	Q96AH0	204 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	DUS3L	Q96G46	650 aa	Known RBP	4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	CDRT15	Q96T59	188 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	PITX2	Q99697	317 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	PRSS27	Q9BQR3	290 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF426	Q9BUY5	554 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	HIPK2	Q9H2X6	1198 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	SPAG4	Q9NPE6	437 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	MEPE	Q9NQ76	525 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	SAR1A	Q9NR31	198 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	FGFR1OP2	Q9NVK5	253 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	C19orf73	Q9NVV2	129 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	PGPEP1	Q9NXJ5	209 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	VNN3	Q9NY84	501 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	PTTG3P	Q9NZH4	202 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	KIAA1456	Q9P272	454 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	GMPR2	Q9P2T1	348 aa	Known RBP	4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	DNAH17	Q9UFH2	4485 aa		4.23	□□□□□ -1.73
SEC13-219	ENST00000492602	TRAV27	A0A087WT01	109 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	NUPR2	A6NF83	97 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	UNC119B	A6NIH7	251 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602		H3BSH0	61 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	IMPA2	O14732	288 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	ATP8B1	O43520	1251 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	GADD45G	O95257	159 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms