RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MRPL15Q9P015 296 aaKnown RBP7.6□□□□□ -1.19
HDAC3-212ENST00000492407 ARMCX1Q9P291 453 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 RNF7Q9UBF6 113 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 GMPPBQ9Y5P6 360 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 WNK2Q9Y3S1 2297 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 TRAV38-1A0A0B4J264 116 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 TRAV40A0A0B4J280 105 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 XKRY2A2RUG3 117 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 PCP4L1A6NKN8 68 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 F5H5K5 113 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 LGALS8O00214 317 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 DCTN6O00399 190 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 TOR1AO14656 332 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 HOXA3O43365 443 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-212ENST00000492407 DHFRP00374 187 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 KNG1P01042 644 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 LCATP04180 440 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 PRDX6P30041 224 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 OTX1P32242 354 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-212ENST00000492407 GGT2P36268 569 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 TALDO1P37837 337 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 DDOSTP39656 456 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 FGF12P61328 243 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 HABP2Q14520 560 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-212ENST00000492407 SEC23BQ15437 767 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 DEFB112Q30KQ8 113 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 RPL13AP3Q6NVV1 102 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 DRAM2Q6UX65 266 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 C17orf107Q6ZR85 190 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 SPATC1Q76KD6 591 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 LINC00471Q8N535 108 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-212ENST00000492407 BHLHE23Q8NDY6 225 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 OR4C15Q8NGM1 316 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 TBC1D15Q8TC07 691 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 NPRL2Q8WTW4 380 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 SSMEM1Q8WWF3 244 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 GATAD2BQ8WXI9 593 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 DYRK2Q92630 601 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 SLCO4A1Q96BD0 722 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 TSSK2Q96PF2 358 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 NMNAT3Q96T66 252 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 OR52D1Q9H346 318 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 S100A14Q9HCY8 104 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 SPAG4Q9NPE6 437 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 PNRC2Q9NPJ4 139 aaKnown RBP7.59□□□□□ -1.19
HDAC3-212ENST00000492407 C19orf12Q9NSK7 152 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 KAAG1Q9UBP8 84 aa7.59□□□□□ -1.19
HDAC3-212ENST00000492407 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-212ENST00000492407 TRBV4-1A0A0J9YWV2 114 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 CLPSL1A2RUU4 121 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 FAM181BA6NEQ2 426 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 CD300LBA8K4G0 201 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 M0QZ24 198 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 M0R135 149 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 TIMM23O14925 209 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 FAM20BO75063 409 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 KRT36O76013 467 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 ZNF205O95201 554 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 GADD45GO95257 159 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 GPANK1O95872 356 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 HLA-DPB1P04440 258 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 MMP9P14780 707 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 HIST1H1CP16403 213 aaKnown RBP7.58□□□□□ -1.2
HDAC3-212ENST00000492407 ZNF823P16415 610 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 MDKP21741 143 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-212ENST00000492407 CFHR2P36980 270 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 NUDT2P50583 147 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 GBX2P52951 348 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-212ENST00000492407 RAG2P55895 527 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 PSME3P61289 254 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 OR8G1Q15617 311 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 MEP1BQ16820 701 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 YIF1BQ5BJH7 314 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 OLFML2AQ68BL7 652 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 LYPD2Q6UXB3 125 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 ETV3LQ6ZN32 361 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 ZNF620Q6ZNG0 422 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 CFAP77Q6ZQR2 320 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 MRPL21Q7Z2W9 205 aaKnown RBP7.58□□□□□ -1.2
HDAC3-212ENST00000492407 LHFPL3Q86UP9 236 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 OR2T4Q8NH00 348 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 GRPEL2Q8TAA5 225 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 DNAJC9Q8WXX5 260 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 MCUR1Q96AQ8 359 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 ZNF799Q96GE5 643 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 PYURFQ96I23 114 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 LRGUKQ96M69 825 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 CITED1Q99966 193 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 IFT27Q9BW83 186 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 TBC1D23Q9NUY8 699 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 C14orf119Q9NWQ9 140 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 C1RLQ9NZP8 487 aa7.58□□□□□ -1.2
HDAC3-212ENST00000492407 GMPR2Q9P2T1 348 aaKnown RBP7.58□□□□□ -1.2
HDAC3-212ENST00000492407 IGHV3OR16-10A0A075B7F0 116 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 A0A087X0M5 115 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 CENPVL3A0A0U1RRI6 287 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 A0A1B0GX30 115 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 OR6C68A6NDL8 312 aa7.57□□□□□ -1.2
HDAC3-212ENST00000492407 OOEPA6NGQ2 149 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms