RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 DUX4L6P0CJ89 424 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 DUX4L7P0CJ90 424 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 SAA4P35542 130 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 CDKN2AP42771 156 aaKnown RBP11.85□□□□□ -0.51
SSR4-212ENST00000491833 KLRD1Q13241 179 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 MICBQ29980 383 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 RFX4Q33E94 735 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 SLC36A3Q495N2 470 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 ZNF770Q6IQ21 691 aaPredicted RBP11.85□□□□□ -0.51
SSR4-212ENST00000491833 DUX4L9Q6RFH8 374 aaPredicted RBP11.85□□□□□ -0.51
SSR4-212ENST00000491833 C1orf122Q6ZSJ8 110 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 SLC36A1Q7Z2H8 476 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 NAA40Q86UY6 237 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 FGFRL1Q8N441 504 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 KLHDC1Q8N7A1 406 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 LY6G5BQ8NDX9 201 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 SLC26A10Q8NG04 563 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 OR2T33Q8NG76 320 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 OR4C13Q8NGP0 309 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 CFHR4Q92496 578 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 EME1Q96AY2 570 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 NIPSNAP1Q9BPW8 284 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 C9orf16Q9BUW7 83 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 TSSK6Q9BXA6 273 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 GABARAPL1Q9H0R8 117 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 C14orf119Q9NWQ9 140 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 AURKAIP1Q9NWT8 199 aaPredicted RBP11.85□□□□□ -0.51
SSR4-212ENST00000491833 DNAJB11Q9UBS4 358 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 DUX4Q9UBX2 424 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 FOXJ3Q9UPW0 622 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 SIGLEC9Q9Y336 463 aa11.85□□□□□ -0.51
SSR4-212ENST00000491833 MEIOCA2RUB1 952 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 RIIAD1A6NNX1 92 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 PTP4A3O75365 173 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 ZNF3P17036 446 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 PRKACGP22612 351 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 ZNF92Q03936 586 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 PRB3Q04118 309 aaPredicted RBP11.84□□□□□ -0.51
SSR4-212ENST00000491833 POU4F2Q12837 409 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 PCK2Q16822 640 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 WDR38Q5JTN6 314 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 FAM216BQ8N7L0 139 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 OR4S1Q8NGB4 309 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 OR2AE1Q8NHA4 323 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 OR2T6Q8NHC8 308 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 SGCDQ92629 289 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 SPTSSAQ969W0 71 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 CCL13Q99616 98 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 OSBPL10Q9BXB5 764 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 PNRC2Q9NPJ4 139 aaKnown RBP11.84□□□□□ -0.51
SSR4-212ENST00000491833 B9D1Q9UPM9 204 aa11.84□□□□□ -0.51
SSR4-212ENST00000491833 H3BUX3 64 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 BHLHE40O14503 412 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 NDUFB3O43676 98 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 IDH3BO43837 385 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 LHBP01229 141 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 OSMP13725 252 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 MUC1P15941 1255 aaPredicted RBP11.83□□□□□ -0.52
SSR4-212ENST00000491833 PAICSP22234 425 aaKnown RBP11.83□□□□□ -0.52
SSR4-212ENST00000491833 GRK5P34947 590 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 FXYD6P3P58550 94 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 SNAI3Q3KNW1 292 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 OXLD1Q5BKU9 147 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 VAX1Q5SQQ9 334 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 OR6V1Q8N148 313 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 LNX2Q8N448 690 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 LRRC29Q8WV35 223 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 CIB1Q99828 191 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 DCTN5Q9BTE1 182 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 VCXQ9H320 206 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 RIBC2Q9H4K1 309 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 OPA3Q9H6K4 179 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 RANBP3Q9H6Z4 567 aaPredicted RBP11.83□□□□□ -0.52
SSR4-212ENST00000491833 RNPEPL1Q9HAU8 725 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 SRA1Q9HD15 236 aaKnown RBP11.83□□□□□ -0.52
SSR4-212ENST00000491833 CYB5R1Q9UHQ9 305 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 MAB21L2Q9Y586 359 aa11.83□□□□□ -0.52
SSR4-212ENST00000491833 EI24O14681 340 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 HLA-DQA2P01906 255 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 KIR2DS4P43632 304 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 UBE2E1P51965 193 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 DLX1P56177 255 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 ELF3P78545 371 aaPredicted RBP11.82□□□□□ -0.52
SSR4-212ENST00000491833 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.82□□□□□ -0.52
SSR4-212ENST00000491833 ACSM1Q08AH1 577 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 IKZF1Q13422 519 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 LRRC10Q5BKY1 277 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 GLYATL3Q5SZD4 288 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 NCR3LG1Q68D85 454 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 FAHD1Q6P587 224 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 CD300LDQ6UXZ3 194 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 PNKDQ8N490 385 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 IQCF1Q8N6M8 205 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 Q8N7P7 452 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 BEND2Q8NDZ0 799 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 SDR9C7Q8NEX9 313 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 OR56B2PQ8NGI1 322 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 OR8S1Q8NH09 359 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 OR4K13Q8NH42 304 aa11.82□□□□□ -0.52
SSR4-212ENST00000491833 C8orf46Q8TAG6 207 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms