RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ALOX5APP20292 161 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 CFHR2P36980 270 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 RIDAP52758 137 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 IL13RA1P78552 427 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 EFNB1P98172 346 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 PAX2Q02962 417 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 POU4F2Q12837 409 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 PRDX4Q13162 271 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 C12orf73Q69YU5 71 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 SHISA2Q6UWI4 295 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 ZNF826PQ6ZT77 177 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 AMIGO2Q86SJ2 522 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 SCCPDHQ8NBX0 429 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 OR10Z1Q8NGY1 313 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 ZNF671Q8TAW3 534 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 TMEM163Q8TC26 289 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 TRUB1Q8WWH5 349 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 CNN2Q99439 309 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 DNTTIP1Q9H147 329 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 CNTD2Q9H8S5 307 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 OAZ3Q9UMX2 235 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 RHBDD3Q9Y3P4 386 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 FBN3Q75N90 2809 aa13.77□□□□□ -0.2
PDLIM2-217ENST00000491330 IGHV3OR16-10A0A075B7F0 116 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 POM121CA8CG34 1229 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF850A8MQ14 1090 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 PLATP00750 562 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 LHBP01229 141 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 RNASE1P07998 156 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 PSKH1P11801 424 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 RBMXP38159 391 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 RIPPLY1Q0D2K3 151 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 BLMHQ13867 455 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 AWAT1Q58HT5 328 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 DOCK11Q5JSL3 2073 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 TMEM236Q5W0B7 351 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF841Q6ZN19 808 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 BTN2A1Q7KYR7 527 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 MEPCEQ7L2J0 689 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 PRSS45Q7RTY3 260 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF679Q8IYX0 411 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 OR8J1Q8NGP2 316 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 TBC1D15Q8TC07 691 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 RFKQ969G6 155 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 WDFY2Q96P53 400 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 ESM1Q9NQ30 184 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 USE1Q9NZ43 259 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 GTF2A1LQ9UNN4 478 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 FAM96BQ9Y3D0 163 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 WNK2Q9Y3S1 2297 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 LRP12Q9Y561 859 aa13.77□□□□□ -0.21
PDLIM2-217ENST00000491330 A0A0U1RQV5 110 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 A0A1B0GUS0 222 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF670-ZNF695F2Z2N8 137 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 IGHV4-38-2P0DP08 117 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 EEF1B2P24534 225 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 ATP6V1E1P36543 226 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 CDC42P60953 191 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 GNG3P63215 75 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 ROM1Q03395 351 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 C16orf87Q6PH81 154 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 WDR82Q6UXN9 313 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 FAM90A1Q86YD7 464 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 BCL6BQ8N143 479 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 OR5P3Q8WZ94 311 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 DUX5Q96PT3 197 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 CIB1Q99828 191 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 PKP2Q99959 881 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 MOB1AQ9H8S9 216 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 WARS2Q9UGM6 360 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 KPTNQ9Y664 436 aa13.76□□□□□ -0.21
PDLIM2-217ENST00000491330 A0A1B0GVI7 797 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 C5orf63A6NC05 138 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 BTBD17A6NE02 478 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 C22orf46C9J442 243 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 PRKYO43930 277 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 ARF6P62330 175 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 KPNB1Q14974 876 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 CDONQ4KMG0 1287 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 ZBTB37Q5TC79 503 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 AADACL4Q5VUY2 407 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 TMEM86BQ8N661 226 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 OR5A2Q8NGI9 324 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 PYDC1Q8WXC3 89 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 TMIGD2Q96BF3 282 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 ITPKCQ96DU7 683 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 AMELYQ99218 206 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 MYCBPQ99417 103 aaPredicted RBP13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 CCL13Q99616 98 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 ENPP5Q9UJA9 477 aa13.75□□□□□ -0.21
PDLIM2-217ENST00000491330 IGHV3OR15-7A0A075B7D8 119 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 A0A1W2PPH5 198 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 OR5B21A6NL26 309 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 SNTNA6NMZ2 147 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 SRRM5B3KS81 715 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 ALPLP05186 524 aa13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 MRPL3P09001 348 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-217ENST00000491330 GLRA1P23415 457 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms