RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 NRASP01111 189 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 TIMP3P35625 211 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 MAP2K3P46734 347 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 INPP1P49441 399 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 BCAP31P51572 246 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 MTCP1P56278 107 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 TAS2R20P59543 309 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 SCN1BQ07699 218 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 ALKBH6Q3KRA9 238 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 C1orf100Q5SVJ3 147 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 MRPL21Q7Z2W9 205 aaKnown RBP12.01□□□□□ -0.49
SMPD4-219ENST00000491128 NKAIN3Q8N8D7 197 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 OR52I2Q8NH67 350 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 PAPOLGQ9BWT3 736 aaKnown RBP12.01□□□□□ -0.49
SMPD4-219ENST00000491128 OR2J1Q9GZK6 312 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 ABCG5Q9H222 651 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 ROS1P08922 2347 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 GGT3PA6NGU5 568 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 CEACAM8P31997 349 aaPredicted RBP12□□□□□ -0.49
SMPD4-219ENST00000491128 THBS4P35443 961 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 PLA2G5P39877 138 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 MMP15P51511 669 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 ZNF83P51522 516 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 PLCXD3Q63HM9 321 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 PYHIN1Q6K0P9 492 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 FAAP20Q6NZ36 180 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 TNFAIP8L1Q8WVP5 186 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 APOBEC3DQ96AK3 386 aaPredicted RBP12□□□□□ -0.49
SMPD4-219ENST00000491128 MPIG6BO95866 241 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 SERPINA2P20848 420 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 TBC1D28Q2M2D7 210 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 CCBE1Q6UXH8 406 aaPredicted RBP12□□□□□ -0.49
SMPD4-219ENST00000491128 BEND4Q6ZU67 534 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 YIPF5Q969M3 257 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 TRIM63Q969Q1 353 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 ZC3HAV1LQ96H79 300 aaKnown RBP12□□□□□ -0.49
SMPD4-219ENST00000491128 REPIN1Q9BWE0 567 aaKnown RBP12□□□□□ -0.49
SMPD4-219ENST00000491128 ZNF581Q9P0T4 197 aa12□□□□□ -0.49
SMPD4-219ENST00000491128 WIPF3A6NGB9 483 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 XRCC2O43543 280 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 CRTAPO75718 401 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-219ENST00000491128 CECR9P0C854 216 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 VEGFCP49767 419 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 PDCD1Q15116 288 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 PP6455Q8WZ26 134 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 C1orf147Q96MC9 270 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-219ENST00000491128 ETV7Q9Y603 341 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 CACNA1BQ00975 2339 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 KLRB1Q12918 225 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 MALLQ13021 153 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 SF3B4Q15427 424 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■■■■■ 101.4
SMPD4-219ENST00000491128 OR8B8Q15620 311 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 TMEM255AQ5JRV8 349 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 OLFML2AQ68BL7 652 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 SFRP4Q6FHJ7 346 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-219ENST00000491128 CHST4Q8NCG5 386 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 AKAP1Q92667 903 aaKnown RBP eCLIP11.99□□□□□ -0.492e-7■■■■□ 20
SMPD4-219ENST00000491128 PHF21AQ96BD5 680 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 WBP1Q96G27 269 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 FGF23Q9GZV9 251 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-219ENST00000491128 PRORYQ9H606 182 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 CDH20Q9HBT6 801 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 NEK6Q9HC98 313 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 CFAP46Q8IYW2 2715 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 ICE1Q9Y2F5 2266 aa11.99□□□□□ -0.49
SMPD4-219ENST00000491128 ISPDA4D126 451 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 LDLRAD4O15165 306 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 ORC5O43913 435 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 ERCC1P07992 297 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-219ENST00000491128 TMEM225BP0DP42 221 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 COX5BP10606 129 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 SELEP16581 610 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 PTGFRP43088 359 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 RAB25P57735 213 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 DEFA1P59665 94 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 DEFA3P59666 94 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 QRFPP83859 136 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 MRPL49Q13405 166 aaKnown RBP11.98□□□□□ -0.49
SMPD4-219ENST00000491128 CLVS2Q5SYC1 327 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 SSC4DQ8WTU2 575 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 SPSB4Q96A44 273 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 A0A0A6YYD4 124 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 OR5H1A6NKK0 313 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 A8MXE2 369 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 SMPD2O60906 423 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 CD37P11049 281 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 GPM6AP51674 278 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 CALHM1Q8IU99 346 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 OR1J1Q8NGS3 322 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 UBASH3BQ8TF42 649 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 RAB40AQ8WXH6 277 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 FOXRED1Q96CU9 486 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-219ENST00000491128 NPAP1Q9NZP6 1156 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 ZNF835Q9Y2P0 537 aa11.98□□□□□ -0.49
SMPD4-219ENST00000491128 IGHV1-18A0A0C4DH31 117 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 ZNF816-ZNF321PA0A0X1KG74 233 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 TMEM235A6NFC5 223 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 CD300LBA8K4G0 201 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 M0R1B8 84 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 SOCS1O15524 211 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms