RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 FIGNL2A6NMB9 653 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 RAD51DO75771 328 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 DXOO77932 396 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 MPIG6BO95866 241 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 H2BFMP0C1H6 154 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 MAS1LP35410 378 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF93P35789 620 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 C1orf61Q13536 156 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 RNF144BQ7Z419 303 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 UBAC2Q8NBM4 344 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 CD300LFQ8TDQ1 290 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 NXF5Q9H1B4 397 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 OPA3Q9H6K4 179 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 IGHV1OR15-9A0A0B4J2B8 117 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 SYT7O43581 403 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF354AO60765 605 aaPredicted RBP17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 TTRP02766 147 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 AMY2BP19961 511 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 MMP16P51512 607 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 C1orf140Q5VVS0 124 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 DBX2Q6ZNG2 339 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 OR5D14Q8NGL3 314 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 AKR7LQ8NHP1 331 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 SPACA5Q96QH8 159 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 ADOQ96SZ5 270 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 IFITM10A6NMD0 228 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 KIAA0141Q14154 515 aaPredicted RBP17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 GLIPR1L1Q6UWM5 242 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 DEFB123Q8N688 67 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 PRRX2Q99811 253 aa17.1■□□□□ 0.33
SNAPC3-206ENST00000490969 SDCBPO00560 298 aaPredicted RBP17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 DEDDO75618 318 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 NUDT14O95848 222 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 IGHMP01871 453 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 DANCRP0C864 163 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 OR3A2P47893 321 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 RAB1AP62820 205 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 FMODQ06828 376 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 FZD2Q14332 565 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 DEGS2Q6QHC5 323 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF321PQ8N8H1 164 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 RHBDD1Q8TEB9 315 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 CHRDQ9H2X0 955 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 FAM206AQ9NX38 181 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 SRPK3Q9UPE1 567 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 SPAG17Q6Q759 2223 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 CDX1P47902 265 aaPredicted RBP17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 TMEM50BP56557 158 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF529Q6P280 563 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 HEPN1Q6WQI6 88 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 HIST2H3AQ71DI3 136 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 PRR22Q8IZ63 422 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 SLC25A43Q8WUT9 341 aaPredicted RBP17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 YPEL4Q96NS1 127 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 BANF2Q9H503 90 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 KCNJ16Q9NPI9 418 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 CUTCQ9NTM9 273 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 B3GALT5Q9Y2C3 310 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 MRPS28Q9Y2Q9 187 aaKnown RBP17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 HS3ST3A1Q9Y663 406 aa17.09■□□□□ 0.33
SNAPC3-206ENST00000490969 PLPP3O14495 311 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 LY86O95711 162 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 THEGLP0DJG4 465 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 BCKDHBP21953 392 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 RPS23P62266 143 aaKnown RBP17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 PCK2Q16822 640 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 OOSP2Q86WS3 158 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF383Q8NA42 475 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 ERGIC1Q969X5 290 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 GNRHR2Q96P88 292 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 SLC35B3Q9H1N7 401 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 C1orf123Q9NWV4 160 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 LUZP4Q9P127 313 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 HDGFL3Q9Y3E1 203 aa17.08■□□□□ 0.33
SNAPC3-206ENST00000490969 C17orf105B2RV13 164 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 CDC14BO60729 498 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 KNG1P01042 644 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 ITGA3P26006 1051 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 CAMLGP49069 296 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 FHITP49789 147 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 FOXK1P85037 733 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 ARFRP1Q13795 201 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 CDPF1Q6NVV7 123 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 PNLDC1Q8NA58 520 aaKnown RBP17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 EMG1Q92979 244 aaKnown RBP17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 ARHGAP5-AS1Q96IT6 56 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 CHST5Q9GZS9 411 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 ARV1Q9H2C2 271 aa17.08■□□□□ 0.32
SNAPC3-206ENST00000490969 A0A1W2PPC4 97 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 A8MVM7 634 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 TNFRSF10CO14798 259 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 OR2C1O95371 312 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 ATXN8OSP0DMR3 200 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 HLA-DOBP13765 273 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 S100A2P29034 98 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 PTGER4P35408 488 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 SLC26A5P58743 744 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 YPEL5P62699 121 aa17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 RPUSD3Q6P087 351 aaKnown RBP17.07■□□□□ 0.32
SNAPC3-206ENST00000490969 FNDC9Q8TBE3 224 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms