RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ZNF321PQ8N8H1 164 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 RBMXL1Q96E39 390 aaKnown RBP11.46□□□□□ -0.58
SHOX2-205ENST00000490689 CEP250Q9BV73 2442 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 PATJQ8NI35 1801 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 TRAV14DV4A0A0A6YYC5 116 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 MPTX1A8MV57 137 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 CDRT15L2A8MXV6 281 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 ONECUT2O95948 504 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 HLA-HP01893 362 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 CELA2BP08218 269 aaPredicted RBP11.46□□□□□ -0.58
SHOX2-205ENST00000490689 SCAND1P57086 179 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF141Q15928 474 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 C6orf201Q7Z4U5 140 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 SHISA5Q8N114 240 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 ULBP2Q9BZM5 246 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 A0A1W2PPC1 479 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 RAB27BO00194 218 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 RER1O15258 196 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 TK1P04183 234 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 GSTP1P09211 210 aaKnown RBP11.45□□□□□ -0.58
SHOX2-205ENST00000490689 VSIG8P0DPA2 414 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 SULT1A1P50225 295 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 EFNA3P52797 238 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 ELLP55199 621 aaPredicted RBP11.45□□□□□ -0.58
SHOX2-205ENST00000490689 B2MP61769 119 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 PLCXD3Q63HM9 321 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 SPRED2Q7Z698 418 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 SLC38A9Q8NBW4 561 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 FOXQ1Q9C009 403 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 ICAM5Q9UMF0 924 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 CT45A8P0DMV1 189 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 CT45A9P0DMV2 189 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 ERGP11308 486 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 SLC25A4P12235 298 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 CT45A2Q5DJT8 189 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 LINC01590Q5TEZ4 76 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 ATG4DQ86TL0 474 aaPredicted RBP11.45□□□□□ -0.58
SHOX2-205ENST00000490689 MCEMP1Q8IX19 187 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 PRR32B1ATL7 298 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 E9PQ18 207 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 CD63P08962 238 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 HLA-DOBP13765 273 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 ZBTB25P24278 435 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 LPAR6P43657 344 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 DCAF7P61962 342 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 TLE4Q04727 773 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 GGTLC2Q14390 218 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 GGNBP1Q5YKI7 109 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 C5orf46Q6UWT4 87 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 DPPA2Q7Z7J5 298 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 MISPQ8IVT2 679 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 OR51H1Q8NH63 302 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 SAT2Q96F10 170 aaPredicted RBP11.45□□□□□ -0.58
SHOX2-205ENST00000490689 MEGF10Q96KG7 1140 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 RPP25Q9BUL9 199 aaKnown RBP11.45□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF426Q9BUY5 554 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 PLEKHA2Q9HB19 425 aa11.45□□□□□ -0.58
SHOX2-205ENST00000490689 ARHGEF17Q96PE2 2063 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-205ENST00000490689 EFSO43281 561 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 DUSP1P28562 367 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 MLF1P58340 268 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 C17orf67Q0P5P2 114 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 CA5BP1Q8WTZ4 195 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 GFI1Q99684 422 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 CABLES2Q9BTV7 478 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 SLC35B3Q9H1N7 401 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 MSGN1A6NI15 193 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 CD300LBA8K4G0 201 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 TP53I11O14683 189 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 EIF4E2O60573 245 aaKnown RBP11.44□□□□□ -0.58
SHOX2-205ENST00000490689 FPR2P25090 351 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF610Q8N9Z0 462 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 ZSCAN4Q8NAM6 433 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-205ENST00000490689 LIN37Q96GY3 246 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-205ENST00000490689 NECAP2Q9NVZ3 263 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 ESPL1Q14674 2120 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 TRBV5-5A0A0J9YX44 114 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 FAM221BA6H8Z2 402 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 H0YIG0 161 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 J3QRE1 110 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 SPRY1O43609 319 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-205ENST00000490689 DUX1O43812 170 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 MGAT2Q10469 447 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF705AQ6ZN79 300 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF383Q8NA42 475 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 LFNGQ8NES3 379 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 OR5L2Q8NGL0 311 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 OR2I1PQ8NGU4 316 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 INTS12Q96CB8 462 aaKnown RBP11.44□□□□□ -0.58
SHOX2-205ENST00000490689 PLK3Q9H4B4 646 aa11.44□□□□□ -0.58
SHOX2-205ENST00000490689 HSPB2A8KAH6 182 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 ADAM10O14672 748 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 IL33O95760 270 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 CTSBP07858 339 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 RRADP55042 308 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 SLC35A1P78382 337 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 HSPB2Q16082 182 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 C1orf87Q8N0U7 546 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 MALSU1Q96EH3 234 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 ADAT3Q96EY9 351 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms