RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 OR4K13Q8NH42 304 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 ANGPTL6Q8NI99 470 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 RORBQ92753 470 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 C7orf34Q96L11 122 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 ATP6V1G3Q96LB4 118 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 WWC2-AS2Q96NR7 200 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 KCNJ15Q99712 375 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 CITED2Q99967 270 aaPredicted RBP6.64□□□□□ -1.35
USP39-216ENST00000490193 INTS9Q9NV88 658 aaKnown RBP6.64□□□□□ -1.35
USP39-216ENST00000490193 NDUFAF4Q9P032 175 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 SLC25A10Q9UBX3 287 aaPredicted RBP6.64□□□□□ -1.35
USP39-216ENST00000490193 CD300AQ9UGN4 299 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 hCG_38984A0A1B0GV85 526 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 A0A1W2PQ09 198 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 CDIPTO14735 213 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 RRP9O43818 475 aaKnown RBP6.63□□□□□ -1.35
USP39-216ENST00000490193 SERPINA1P01009 418 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 ACAA1P09110 424 aaPredicted RBP6.63□□□□□ -1.35
USP39-216ENST00000490193 FAHP16930 419 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 CFL1P23528 166 aaKnown RBP6.63□□□□□ -1.35
USP39-216ENST00000490193 RPS27P42677 84 aaKnown RBP6.63□□□□□ -1.35
USP39-216ENST00000490193 PRKXP51817 358 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 LIPEQ05469 1076 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 SNCBQ16143 134 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 KLHL12Q53G59 568 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 FAM76BQ5HYJ3 339 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 TEX30Q5JUR7 227 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 PRSS45Q7RTY3 260 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 DCXRQ7Z4W1 244 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 SLC15A3Q8IY34 581 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 LNX2Q8N448 690 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 CSNK2A3Q8NEV1 391 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 OR5T2Q8NGG2 359 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 OR5K1Q8NHB7 308 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 DUS3LQ96G46 650 aaKnown RBP6.63□□□□□ -1.35
USP39-216ENST00000490193 DDOQ99489 341 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 COPS4Q9BT78 406 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 WDR13Q9H1Z4 485 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 FN3KQ9H479 309 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 SAR1AQ9NR31 198 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 ZNF391Q9UJN7 358 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 FAM32AQ9Y421 112 aaKnown RBP6.63□□□□□ -1.35
USP39-216ENST00000490193 LRP12Q9Y561 859 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 COMMD3-BMI1R4GMX3 469 aa6.63□□□□□ -1.35
USP39-216ENST00000490193 LOC100653049A0A140TA62 436 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 FAM90A8PA6NJQ4 464 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 TMEM210A6NLX4 147 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 ZNF878C9JN71 531 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 H0YAE9 185 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 NME4O00746 187 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 SLC22A2O15244 555 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 ANGPTL7O43827 346 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 KRT34O76011 436 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 SLC2A1P11166 492 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 IGLL1P15814 213 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 NDUFB7P17568 137 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 CD33P20138 364 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 PAICSP22234 425 aaKnown RBP6.62□□□□□ -1.35
USP39-216ENST00000490193 DCTDP32321 178 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 GSSP48637 474 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 BMXP51813 675 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 SLC7A2P52569 658 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 GRB2P62993 217 aaKnown RBP6.62□□□□□ -1.35
USP39-216ENST00000490193 CD83Q01151 205 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 IL5RAQ01344 420 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.62□□□□□ -1.35
USP39-216ENST00000490193 HABP2Q14520 560 aaPredicted RBP6.62□□□□□ -1.35
USP39-216ENST00000490193 ZBTB37Q5TC79 503 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 C8orf82Q6P1X6 216 aaPredicted RBP6.62□□□□□ -1.35
USP39-216ENST00000490193 FTMTQ8N4E7 242 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 OR2T4Q8NH00 348 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 SGK3Q96BR1 496 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 RCN3Q96D15 328 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 SLAMF6Q96DU3 332 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 REEP6Q96HR9 211 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 MICU1Q9BPX6 476 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 IFT27Q9BW83 186 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 RTL8AQ9BWD3 113 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 PPP1R3EQ9H7J1 279 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 HEXA-AS1Q9H8Q6 139 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 SP140LQ9H930 580 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 ABCB9Q9NP78 766 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 SNTG1Q9NSN8 517 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 ZNF222Q9UK12 451 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 TCF19Q9Y242 345 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 MPC1Q9Y5U8 109 aa6.62□□□□□ -1.35
USP39-216ENST00000490193 IGKV1D-17A0A075B6S4 117 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 A6NDX4 124 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 TVP23AA6NH52 213 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 ANXA2P2A6NMY6 339 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 OR2AT4A6NND4 320 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 GSTA4O15217 222 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 GLCEO94923 617 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 DUS4LO95620 317 aaKnown RBP6.61□□□□□ -1.35
USP39-216ENST00000490193 APOC1P02654 83 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 TFF1P04155 84 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 PAX6P26367 422 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 PYCR1P32322 319 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 GNALP38405 381 aa6.61□□□□□ -1.35
USP39-216ENST00000490193 SLC15A1P46059 708 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms