RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 CDC42EP3Q9UKI2 254 aa9□□□□□ -0.97
SCAMP4-208ENST00000489554 SONP18583 2426 aaKnown RBP9□□□□□ -0.97
SCAMP4-208ENST00000489554 ANK3Q12955 4377 aaKnown RBP8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 A0A075B6Q4 140 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 A0A1B0GTI1 187 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 TMEM269A0A1B0GVZ9 245 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 TRDV1A0A1B0GX56 115 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 C5orf49A4QMS7 147 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 C17orf100A8MU93 164 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 LMX1BO60663 402 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 ZFPL1O95159 310 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 SERPINA3P01011 423 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 NGFP01138 241 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 IFNA2P01563 188 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 CD1AP06126 327 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 NAT2P11245 290 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF12P17014 697 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 ACHEP22303 614 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 CFL1P23528 166 aaKnown RBP8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 HSD11B1P28845 292 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 CD40LGP29965 261 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 GCH1P30793 250 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 FGF9P31371 208 aaPredicted RBP8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 CCR9P51686 369 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 GBX2P52951 348 aaPredicted RBP8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 NCS1P62166 190 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 PCGF3Q3KNV8 242 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 LIPKQ5VXJ0 399 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 FAM166AQ6J272 317 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 RPL22L1Q6P5R6 122 aaKnown RBP8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 ARL9Q6T311 187 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 DRAM2Q6UX65 266 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 RFPL4BQ6ZWI9 263 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 FAM220AQ7Z4H9 259 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 ELMOD2Q8IZ81 293 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 MS4A15Q8N5U1 240 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF283Q8N7M2 679 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 OR6Q1Q8NGQ2 317 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 OR10AC1Q8NH08 325 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 HPS1Q92902 700 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 SMIM19Q96E16 107 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 LYZL4Q96KX0 146 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 PDCD1LG2Q9BQ51 273 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 SOX7Q9BT81 388 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 PBOV1Q9GZY1 135 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 OR51E2Q9H255 320 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 CHODLQ9H9P2 273 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 NKIRAS2Q9NYR9 191 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 OR52A1Q9UKL2 312 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 KCNS2Q9ULS6 477 aa8.99□□□□□ -0.97
SCAMP4-208ENST00000489554 LOC100289279A0A1B0GTE1 492 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 ACOD1A6NK06 481 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 KIAA1324LA8MWY0 1029 aaPredicted RBP8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 LOC110117498-PIK3R3F6TDL0 507 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 LILRA1O75019 489 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 SC5DO75845 299 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 IGHV3-13P01766 116 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 HPXP02790 462 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 FAM157CP0CG43 387 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 CELP19835 753 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 CCL1P22362 96 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 BMXP51813 675 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 TPTEP56180 551 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 ERVS71-1P61550 626 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 RPS25P62851 125 aaKnown RBP8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 TAF13Q15543 124 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 ZNF718Q3SXZ3 478 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 TMEM255AQ5JRV8 349 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 Q6ZSR3 168 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 FAM57BQ71RH2 274 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 MINDY2Q8NBR6 621 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 OR13C5Q8NGS8 318 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 NDNFQ8TB73 568 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 SPTSSAQ969W0 71 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 MSI2Q96DH6 328 aaKnown RBP8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 CEP19Q96LK0 163 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 SLIRPQ9GZT3 109 aaKnown RBP8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 NXF2Q9GZY0 626 aaKnown RBP8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 SHARPINQ9H0F6 387 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 MOB1AQ9H8S9 216 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 BRD7Q9NPI1 651 aa8.98□□□□□ -0.97
SCAMP4-208ENST00000489554 CHD3Q12873 2000 aaKnown RBP8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 TRBV2A0A0J9YWF9 115 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 A0A0U1RQV5 110 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 LRP5LA4QPB2 252 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 LYNX1G3V0Z9 82 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 TMEM127O75204 238 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 TGFAP01135 160 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 ISG15P05161 165 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 LYNX1P0DP58 116 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 TUBG1P23258 451 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 CRYBB2P43320 205 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 MAGEB1P43366 347 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 GPR6P46095 362 aaPredicted RBP8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 TMEM33P57088 247 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 PPP1CBP62140 327 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 INSL4Q14641 139 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 ALKBH6Q3KRA9 238 aa8.97□□□□□ -0.97
SCAMP4-208ENST00000489554 FAM209AQ5JX71 171 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms