RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 DPRXA6NFQ7 191 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 CLDN14O95500 239 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 NKX6-1P78426 367 aaPredicted RBP17.91■□□□□ 0.46
SND1-214ENST00000489417 TFF3Q07654 80 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 PSG7Q13046 419 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 PRDX4Q13162 271 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 RGS7BPQ6MZT1 257 aaPredicted RBP17.91■□□□□ 0.46
SND1-214ENST00000489417 CCDC190Q86UF4 302 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 MFSD4AQ8N468 514 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 SAMD12Q8N8I0 201 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 BHLHE23Q8NDY6 225 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 SLC25A28Q96A46 364 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 RADILQ96JH8 1075 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 PPP1R3EQ9H7J1 279 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 SLC7A11Q9UPY5 501 aa17.91■□□□□ 0.46
SND1-214ENST00000489417 IQCF6A8MYZ5 107 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 CLDN25C9JDP6 229 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 GCH1P30793 250 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 GLRXP35754 106 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 SCAND1P57086 179 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 SNTB1Q13884 538 aaKnown RBP17.9■□□□□ 0.46
SND1-214ENST00000489417 ESPL1Q14674 2120 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 KISS1Q15726 138 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 MBNL2Q5VZF2 373 aaKnown RBP17.9■□□□□ 0.46
SND1-214ENST00000489417 RNF144BQ7Z419 303 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 ZDHHC23Q8IYP9 409 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 OR4D6Q8NGJ1 314 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 LINC01560Q8TB33 94 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 FAM3DQ96BQ1 224 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 GPER1Q99527 375 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 CXorf56Q9H5V9 222 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 HMG20AQ9NP66 347 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 PURGQ9UJV8 347 aaKnown RBP17.9■□□□□ 0.46
SND1-214ENST00000489417 MPC1Q9Y5U8 109 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 ETV7Q9Y603 341 aa17.9■□□□□ 0.46
SND1-214ENST00000489417 LILRA1O75019 489 aa17.89■□□□□ 0.46
SND1-214ENST00000489417 KITLGP21583 273 aa17.89■□□□□ 0.46
SND1-214ENST00000489417 RANBP1P43487 201 aa17.89■□□□□ 0.46
SND1-214ENST00000489417 FUT6P51993 359 aa17.89■□□□□ 0.46
SND1-214ENST00000489417 RPS23P62266 143 aaKnown RBP17.89■□□□□ 0.46
SND1-214ENST00000489417 BSPH1Q075Z2 132 aa17.89■□□□□ 0.46
SND1-214ENST00000489417 RIN1Q13671 783 aa17.89■□□□□ 0.46
SND1-214ENST00000489417 ZNF846Q147U1 533 aa17.89■□□□□ 0.46
SND1-214ENST00000489417 LHFPL2Q6ZUX7 228 aa17.89■□□□□ 0.46
SND1-214ENST00000489417 OR51D1Q8NGF3 324 aa17.89■□□□□ 0.46
SND1-214ENST00000489417 BORCS8Q96FH0 119 aa17.89■□□□□ 0.46
SND1-214ENST00000489417 CPNE2Q96FN4 548 aaPredicted RBP17.89■□□□□ 0.46
SND1-214ENST00000489417 WDR12Q9GZL7 423 aaKnown RBP17.89■□□□□ 0.46
SND1-214ENST00000489417 MRPL15Q9P015 296 aaKnown RBP17.89■□□□□ 0.46
SND1-214ENST00000489417 LOC100289279A0A1B0GTE1 492 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 FAM230AA0A1W2PPH8 454 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 FAM25AB3EWG3 89 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 FAM25CB3EWG5 89 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 FAM25GB3EWG6 89 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 ABCD4O14678 606 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 ETV6P41212 452 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 POU3F4P49335 361 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 FABP6P51161 128 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 TMEM255AQ5JRV8 349 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 SPANXN2Q5MJ10 180 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 CRIP3Q6Q6R5 217 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 LRRC28Q86X40 367 aaPredicted RBP17.89■□□□□ 0.45
SND1-214ENST00000489417 PNLDC1Q8NA58 520 aaKnown RBP17.89■□□□□ 0.45
SND1-214ENST00000489417 NUP37Q8NFH4 326 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 RFT1Q96AA3 541 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 DIRAS2Q96HU8 199 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 CMTM3Q96MX0 182 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 FZR1Q9UM11 496 aa17.89■□□□□ 0.45
SND1-214ENST00000489417 MRPS28Q9Y2Q9 187 aaKnown RBP17.89■□□□□ 0.45
SND1-214ENST00000489417 EIF4EP06730 217 aaKnown RBP17.88■□□□□ 0.45
SND1-214ENST00000489417 ARSBP15848 533 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 ELK1P19419 428 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 PEX19P40855 299 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 OR3A4PP47883 348 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 RBP2P50120 134 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 CAPZA1P52907 286 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 MTCP1P56278 107 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 CEACAM21Q3KPI0 293 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 C2orf76Q3KRA6 126 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 ALKBH6Q3KRA9 238 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 UBE2NLQ5JXB2 153 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 NCMAPQ5T1S8 102 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 AWAT2Q6E213 333 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 ANGPTL5Q86XS5 388 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 HPSE2Q8WWQ2 592 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 HIST1H2AAQ96QV6 131 aa17.88■□□□□ 0.45
SND1-214ENST00000489417 ESRP2Q9H6T0 727 aaKnown RBP17.88■□□□□ 0.45
SND1-214ENST00000489417 PCNX1Q96RV3 2341 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 TUBAL3A6NHL2 446 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 TIMM8AO60220 97 aaPredicted RBP17.87■□□□□ 0.45
SND1-214ENST00000489417 BPNT1O95861 308 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 APOA1P02647 267 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 ZNF250P15622 560 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 CA6P23280 308 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 EVX1P49640 407 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 ATP1B3P54709 279 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 ZNF45Q02386 682 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 MSMPQ1L6U9 139 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 CNIH2Q6PI25 160 aa17.87■□□□□ 0.45
SND1-214ENST00000489417 VHLLQ6RSH7 139 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms