RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 HPS1Q92902 700 aa13.52□□□□□ -0.25
HDAC7-224ENST00000488927 ITPKCQ96DU7 683 aa13.52□□□□□ -0.25
HDAC7-224ENST00000488927 MYO9AB2RTY4 2548 aa13.52□□□□□ -0.25
HDAC7-224ENST00000488927 OTOGQ6ZRI0 2925 aa13.52□□□□□ -0.25
HDAC7-224ENST00000488927 PRRC2AP48634 2157 aaKnown RBP13.51□□□□□ -0.25
HDAC7-224ENST00000488927 TMEM210A6NLX4 147 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 CLDN25C9JDP6 229 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 CDC14BO60729 498 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 RP2O75695 350 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 GATBO75879 557 aaKnown RBP13.51□□□□□ -0.25
HDAC7-224ENST00000488927 NRASP01111 189 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 MT-ND2P03891 347 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 RIN1Q13671 783 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 SPHARQ15513 63 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 ZNF181Q2M3W8 571 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 CEACAM21Q3KPI0 293 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 DMKNQ6E0U4 476 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-224ENST00000488927 PEG10Q86TG7 708 aaKnown RBP13.51□□□□□ -0.25
HDAC7-224ENST00000488927 OR11L1Q8NGX0 322 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 OR5P3Q8WZ94 311 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 CCL17Q92583 94 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 YIPF5Q969M3 257 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 TIMD4Q96H15 378 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 PDCD1LG2Q9BQ51 273 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 FN3KRPQ9HA64 309 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 GCM1Q9NP62 436 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 ZNF275Q9NSD4 429 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-224ENST00000488927 TMEM106BQ9NUM4 274 aa13.51□□□□□ -0.25
HDAC7-224ENST00000488927 CREBBPQ92793 2442 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 IGHV4-30-2A0A087WSY4 118 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 ANKRD61A6NGH8 418 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 OR5B21A6NL26 309 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 CD1AP06126 327 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 IRF2P14316 349 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 ZNF20P17024 532 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 GPR6P46095 362 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-224ENST00000488927 MED22Q15528 200 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 TBCEQ15813 527 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-224ENST00000488927 PLCXD3Q63HM9 321 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 XAF1Q6GPH4 301 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 C1orf87Q8N0U7 546 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 SVOPQ8N4V2 548 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 OR5A2Q8NGI9 324 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 OR13C3Q8NGS6 347 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 Q8TCH9 128 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 GPR148Q8TDV2 347 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 SGCDQ92629 289 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 CHST5Q9GZS9 411 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 DHDHQ9UQ10 334 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 ZNF281Q9Y2X9 895 aa13.5□□□□□ -0.25
HDAC7-224ENST00000488927 LSM2Q9Y333 95 aaKnown RBP13.5□□□□□ -0.25
HDAC7-224ENST00000488927 LOC100289279A0A1B0GTE1 492 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 VWC2LB2RUY7 222 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 LYNX1G3V0Z9 82 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 PPIHO43447 177 aaKnown RBP13.49□□□□□ -0.25
HDAC7-224ENST00000488927 PLPP2O43688 288 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 LALBAP00709 142 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 CD2P06729 351 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 LYNX1P0DP58 116 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 NR4A2P43354 598 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 GNG3P63215 75 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 GPR50Q13585 617 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 YIF1BQ5BJH7 314 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 MOB3CQ70IA8 216 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 MOGAT3Q86VF5 341 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 OR1M1Q8NGA1 313 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 TSEN15Q8WW01 171 aaKnown RBP13.49□□□□□ -0.25
HDAC7-224ENST00000488927 THRSPQ92748 146 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 RAB1CQ92928 201 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 DVL3Q92997 716 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-224ENST00000488927 RNF170Q96K19 258 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 NEK6Q9HC98 313 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 ISYNA1Q9NPH2 558 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 SLC7A11Q9UPY5 501 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 LRCH1Q9Y2L9 728 aa13.49□□□□□ -0.25
HDAC7-224ENST00000488927 H3BSH0 61 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 GRPP07492 148 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 CELP19835 753 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 CNN3Q15417 329 aaKnown RBP13.48□□□□□ -0.25
HDAC7-224ENST00000488927 KCTD21Q4G0X4 260 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 SPRNQ5BIV9 151 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 FAM76BQ5HYJ3 339 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 CEP78Q5JTW2 689 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 KCTD8Q6ZWB6 473 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 UTS2BQ765I0 119 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 OR51A4Q8NGJ6 313 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 HPSE2Q8WWQ2 592 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 GHSRQ92847 366 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 FGGYQ96C11 551 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 OR5M11Q96RB7 305 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 REG4Q9BYZ8 158 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 BPESC1Q9GZL8 116 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 TLNRD1Q9H1K6 362 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 CACNG2Q9Y698 323 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 SIRT4Q9Y6E7 314 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-224ENST00000488927 VPS13CQ709C8 3753 aa13.48□□□□□ -0.25
HDAC7-224ENST00000488927 LRP5LA4QPB2 252 aa13.47□□□□□ -0.25
HDAC7-224ENST00000488927 TRIM64A6NGJ6 449 aa13.47□□□□□ -0.25
HDAC7-224ENST00000488927 TRIM64BA6NI03 449 aa13.47□□□□□ -0.25
HDAC7-224ENST00000488927 A6NLC8 198 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms