RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SESN1Q9Y6P5 492 aa11.13□□□□□ -0.63
CLIC4-202ENST00000488683 TRIM77I1YAP6 450 aa11.13□□□□□ -0.63
CLIC4-202ENST00000488683 PCOLCEQ15113 449 aa11.13□□□□□ -0.63
CLIC4-202ENST00000488683 KISS1Q15726 138 aa11.13□□□□□ -0.63
CLIC4-202ENST00000488683 LPCAT3Q6P1A2 487 aa11.13□□□□□ -0.63
CLIC4-202ENST00000488683 CLEC18BQ6UXF7 455 aa11.13□□□□□ -0.63
CLIC4-202ENST00000488683 OR13G1Q8NGZ3 307 aa11.13□□□□□ -0.63
CLIC4-202ENST00000488683 TMED6Q8WW62 240 aa11.13□□□□□ -0.63
CLIC4-202ENST00000488683 MR1Q95460 341 aa11.13□□□□□ -0.63
CLIC4-202ENST00000488683 MOB1AQ9H8S9 216 aa11.13□□□□□ -0.63
CLIC4-202ENST00000488683 BARX1Q9HBU1 254 aaPredicted RBP11.13□□□□□ -0.63
CLIC4-202ENST00000488683 ATP6V1G2-DDX39BF2Z307 99 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 HIST1H1DP16402 221 aaKnown RBP11.12□□□□□ -0.63
CLIC4-202ENST00000488683 BLVRBP30043 206 aaPredicted RBP11.12□□□□□ -0.63
CLIC4-202ENST00000488683 AGTR1P30556 359 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 RFC3P40938 356 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 SUPT4H1P63272 117 aaKnown RBP11.12□□□□□ -0.63
CLIC4-202ENST00000488683 HGFACQ04756 655 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 YRDCQ86U90 279 aaKnown RBP11.12□□□□□ -0.63
CLIC4-202ENST00000488683 ZSCAN4Q8NAM6 433 aaPredicted RBP11.12□□□□□ -0.63
CLIC4-202ENST00000488683 DTWD2Q8NBA8 298 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 SSC4DQ8WTU2 575 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 CLDN23Q96B33 292 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 GAREM1Q9H706 876 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 CHMP1AQ9HD42 196 aaPredicted RBP11.12□□□□□ -0.63
CLIC4-202ENST00000488683 RASL12Q9NYN1 266 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 PIGLQ9Y2B2 252 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 A0A0D9SG52 128 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 MSTNO14793 375 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 HPNP05981 417 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 UMODP07911 640 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 SLC25A4P12235 298 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 HLA-GP17693 338 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 AMY2BP19961 511 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 ID4P47928 161 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 NOVA1P51513 510 aaKnown RBP11.12□□□□□ -0.63
CLIC4-202ENST00000488683 CSNK2A1P68400 391 aaPredicted RBP11.12□□□□□ -0.63
CLIC4-202ENST00000488683 FGL1Q08830 312 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 PGAP1Q75T13 922 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 HOGA1Q86XE5 327 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 CSNK2A3Q8NEV1 391 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 OR14K1Q8NGZ2 314 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 THAP6Q8TBB0 222 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 LRRC46Q96FV0 321 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 SHDQ96IW2 340 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 RNF126Q9BV68 326 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 SRXN1Q9BYN0 137 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 EHFQ9NZC4 300 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 PCDHB10Q9UN67 800 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 SHANK1Q9Y566 2161 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 ZNF407Q9C0G0 2248 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 KIAA1549Q9HCM3 1950 aa11.12□□□□□ -0.63
CLIC4-202ENST00000488683 GPR31O00270 319 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 BCL2L11O43521 198 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 ONECUT2O95948 504 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 UBBP0CG47 229 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 CCL1P22362 96 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 OPRM1P35372 400 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 SNU13P55769 128 aaKnown RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 S100A10P60903 97 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 RPS27AP62979 156 aaKnown RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 UBA52P62987 128 aaKnown RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 ZNF345Q14585 488 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 LYSMD4Q5XG99 296 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 HSD17B13Q7Z5P4 300 aaPredicted RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 OR52H1Q8NGJ2 320 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 FBXO17Q96EF6 278 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 CPNE2Q96FN4 548 aaPredicted RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 RTBDNQ9BSG5 229 aaPredicted RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 SLC26A1Q9H2B4 701 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 PROK2Q9HC23 129 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 MCTS1Q9ULC4 181 aaKnown RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 DNAJC13O75165 2243 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 FAM230AA0A1W2PPH8 454 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 DBX1A6NMT0 343 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 SFTPBP07988 381 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 RCC1P18754 421 aaPredicted RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 PPIAP62937 165 aaKnown RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 ENDOGQ14249 297 aaKnown RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 KCNMB1Q16558 191 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 C9orf135Q5VTT2 229 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 TERB2Q8NHR7 220 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 IFI44Q8TCB0 444 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 ALKBH3Q96Q83 286 aaPredicted RBP11.11□□□□□ -0.63
CLIC4-202ENST00000488683 DUSP23Q9BVJ7 150 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 PLEK2Q9NYT0 353 aa11.11□□□□□ -0.63
CLIC4-202ENST00000488683 MED19A0JLT2 244 aaPredicted RBP11.1□□□□□ -0.63
CLIC4-202ENST00000488683 KRBOX1C9JBD0 128 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 MFNGO00587 321 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 AGPAT2O15120 278 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 OR2F2O95006 317 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 DUS4LO95620 317 aaKnown RBP11.1□□□□□ -0.63
CLIC4-202ENST00000488683 CHRM2P08172 466 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 CD63P08962 238 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 ACKR3P25106 362 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 CSNK1A1P48729 337 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 GSK3AP49840 483 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 H3F3AP84243 136 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 OR2F1Q13607 317 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 PLEKHN1Q494U1 663 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms