RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 RNF170Q96K19 258 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 VCX3BQ9H321 246 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 ACOXLQ9NUZ1 547 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 SLC22A13Q9Y226 551 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 TMEM210A6NLX4 147 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 DHRS7CA6NNS2 312 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 CRLF1O75462 422 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 HTR1AP08908 422 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 ZNF12P17014 697 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 HNF1AP20823 631 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 RBMXP38159 391 aaKnown RBP12.65□□□□□ -0.38
CXCL12-207ENST00000488591 PSMB10P40306 273 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 OR12D2P58182 307 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 ISL1P61371 349 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 HNRNPA0Q13151 305 aaKnown RBP12.65□□□□□ -0.38
CXCL12-207ENST00000488591 KCNJ8Q15842 424 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 SMN1Q16637 294 aaKnown RBP12.65□□□□□ -0.38
CXCL12-207ENST00000488591 ODF4Q2M2E3 257 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 CEACAM21Q3KPI0 293 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 KRT74Q7RTS7 529 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 BOLLQ8N9W6 283 aaKnown RBP12.65□□□□□ -0.38
CXCL12-207ENST00000488591 OR52I1Q8NGK6 324 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 CNIH3Q8TBE1 160 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 OR5P3Q8WZ94 311 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 TMEM186Q96B77 213 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 C4orf36Q96KX1 117 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 ALG8Q9BVK2 526 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 BEX2Q9BXY8 128 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 SHARPINQ9H0F6 387 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 PATZ1Q9HBE1 687 aaKnown RBP12.65□□□□□ -0.38
CXCL12-207ENST00000488591 LPAR2Q9HBW0 351 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 TMEM165Q9HC07 324 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 TRIM36Q9NQ86 728 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 ERVK13-1Q9NX77 482 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 LPAR3Q9UBY5 353 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 CDC42EP3Q9UKI2 254 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 MYRFQ9Y2G1 1151 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 V9GYS6 101 aa12.65□□□□□ -0.38
CXCL12-207ENST00000488591 TRAV20A0A0B4J274 112 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 A0A1B0GTI1 187 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 SYT7O43581 403 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 FOXH1O75593 365 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 ZNF205O95201 554 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 NRASP01111 189 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 IGHA1P01876 353 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 UBCP0CG48 685 aaKnown RBP12.64□□□□□ -0.39
CXCL12-207ENST00000488591 FAHP16930 419 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 DCKP27707 260 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 MRPL28Q13084 256 aaKnown RBP12.64□□□□□ -0.39
CXCL12-207ENST00000488591 ZNF154Q13106 437 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 CHRFAM7AQ494W8 412 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 WDR38Q5JTN6 314 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 FDX2Q6P4F2 183 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 MOB3CQ70IA8 216 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 SYS1Q8N2H4 156 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 OR5A2Q8NGI9 324 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 HAVCR2Q8TDQ0 301 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 PPP1R3EQ9H7J1 279 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 PLEKHA1Q9HB21 404 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 FGF20Q9NP95 211 aaPredicted RBP12.64□□□□□ -0.39
CXCL12-207ENST00000488591 MIOXQ9UGB7 285 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 NF1P21359 2839 aa12.64□□□□□ -0.39
CXCL12-207ENST00000488591 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.63□□□□□ -0.39
CXCL12-207ENST00000488591 TRAV38-1A0A0B4J264 116 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 OR5B21A6NL26 309 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 H0YJX3 145 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 LGALS8O00214 317 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 PLPP2O43688 288 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 HOXB4P17483 251 aaPredicted RBP12.63□□□□□ -0.39
CXCL12-207ENST00000488591 CCL1P22362 96 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 CCR9P51686 369 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 GNG3P63215 75 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 MED21Q13503 144 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 ZNF404Q494X3 552 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 CEP78Q5JTW2 689 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 FAM201AQ5SY85 155 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 CLVS2Q5SYC1 327 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 TMEM244Q5VVB8 128 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 PLCXD3Q63HM9 321 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 ZNF826PQ6ZT77 177 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 NLRC3Q7RTR2 1065 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 PRSS35Q8N3Z0 413 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 DEFB108BQ8NET1 73 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 OR14K1Q8NGZ2 314 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 OR2G2Q8NGZ5 317 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 TMEM246Q9BRR3 403 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 HIF1ANQ9NWT6 349 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 MALRD1Q5VYJ5 2156 aa12.63□□□□□ -0.39
CXCL12-207ENST00000488591 OOEPA6NGQ2 149 aa12.62□□□□□ -0.39
CXCL12-207ENST00000488591 CEACAM18A8MTB9 384 aa12.62□□□□□ -0.39
CXCL12-207ENST00000488591 ZNF732B4DXR9 585 aa12.62□□□□□ -0.39
CXCL12-207ENST00000488591 CDIPTO14735 213 aa12.62□□□□□ -0.39
CXCL12-207ENST00000488591 NDUFA2O43678 99 aa12.62□□□□□ -0.39
CXCL12-207ENST00000488591 SERPINA3P01011 423 aa12.62□□□□□ -0.39
CXCL12-207ENST00000488591 RPSAP08865 295 aaKnown RBP12.62□□□□□ -0.39
CXCL12-207ENST00000488591 WNT2P09544 360 aa12.62□□□□□ -0.39
CXCL12-207ENST00000488591 RPS2P15880 293 aaKnown RBP12.62□□□□□ -0.39
CXCL12-207ENST00000488591 MYL12AP19105 171 aa12.62□□□□□ -0.39
CXCL12-207ENST00000488591 THBS2P35442 1172 aa12.62□□□□□ -0.39
CXCL12-207ENST00000488591 GPM6AP51674 278 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms