RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 OR8H3Q8N146 312 aa17.58■□□□□ 0.4
NECAB3-213ENST00000488489 EXTL1Q92935 676 aa17.58■□□□□ 0.4
NECAB3-213ENST00000488489 FOXRED1Q96CU9 486 aaPredicted RBP17.58■□□□□ 0.4
NECAB3-213ENST00000488489 CTAG2O75638 210 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 CD79AP11912 226 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 ACKR3P25106 362 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 ZP1P60852 638 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 TBR1Q16650 682 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 OR10K2Q6IF99 312 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 RPUSD3Q6P087 351 aaKnown RBP17.57■□□□□ 0.4
NECAB3-213ENST00000488489 ANKRD16Q6P6B7 361 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 TFAP2EQ6VUC0 442 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
NECAB3-213ENST00000488489 OR1K1Q8NGR3 316 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 RADILQ96JH8 1075 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 METTL17Q9H7H0 456 aaPredicted RBP17.57■□□□□ 0.4
NECAB3-213ENST00000488489 TP53TG5Q9Y2B4 290 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 INTS1Q8N201 2190 aaKnown RBP17.57■□□□□ 0.4
NECAB3-213ENST00000488489 OR14I1A6ND48 311 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 LDLRAD4O15165 306 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 KDM4BO94953 1096 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 CCL2P13500 99 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 KIR2DL2P43627 348 aaPredicted RBP17.57■□□□□ 0.4
NECAB3-213ENST00000488489 RAB1AP62820 205 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 ZNF585AQ6P3V2 769 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 BCL2L2Q92843 193 aaPredicted RBP17.57■□□□□ 0.4
NECAB3-213ENST00000488489 WNT2BQ93097 391 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 REEP6Q96HR9 211 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 DHRS9Q9BPW9 319 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 PIGLQ9Y2B2 252 aa17.57■□□□□ 0.4
NECAB3-213ENST00000488489 AHRRA9YTQ3 701 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 PRAF2O60831 178 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 ZNF93P35789 620 aaPredicted RBP17.56■□□□□ 0.4
NECAB3-213ENST00000488489 SEZ6L2Q6UXD5 910 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 CIB4A0PJX0 185 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 ZSCAN5BA6NJL1 495 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 SLC34A2O95436 690 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 ECDO95905 644 aaPredicted RBP17.56■□□□□ 0.4
NECAB3-213ENST00000488489 IFNA7P01567 189 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 HPXP02790 462 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 EDN3P14138 238 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 M6PRP20645 277 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 ZNF81P51508 661 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 TAS2R20P59543 309 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 FOXF2Q12947 444 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 UBE2V2Q15819 145 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 ZNF584Q8IVC4 421 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 CNEP1R1Q8N9A8 125 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 SSC4DQ8WTU2 575 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 UQCC2Q9BRT2 126 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 ZNF436Q9C0F3 470 aaPredicted RBP17.56■□□□□ 0.4
NECAB3-213ENST00000488489 CLEC4MQ9H2X3 399 aaPredicted RBP17.56■□□□□ 0.4
NECAB3-213ENST00000488489 HRASLSQ9HDD0 168 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 ATPIF1Q9UII2 106 aa17.56■□□□□ 0.4
NECAB3-213ENST00000488489 TLN1Q9Y490 2541 aaKnown RBP17.55■□□□□ 0.4
NECAB3-213ENST00000488489 RPS10-NUDT3A0A1W2PQS6 291 aa17.55■□□□□ 0.4
NECAB3-213ENST00000488489 NAP1L6A6NFF2 107 aa17.55■□□□□ 0.4
NECAB3-213ENST00000488489 G3V3Q6 166 aa17.55■□□□□ 0.4
NECAB3-213ENST00000488489 GABARAPH6UMI1 98 aa17.55■□□□□ 0.4
NECAB3-213ENST00000488489 XRCC3O43542 346 aa17.55■□□□□ 0.4
NECAB3-213ENST00000488489 MTRF1O75570 445 aaKnown RBP17.55■□□□□ 0.4
NECAB3-213ENST00000488489 VWA1Q6PCB0 445 aa17.55■□□□□ 0.4
NECAB3-213ENST00000488489 CRIP3Q6Q6R5 217 aa17.55■□□□□ 0.4
NECAB3-213ENST00000488489 DPCDQ9BVM2 203 aaPredicted RBP17.55■□□□□ 0.4
NECAB3-213ENST00000488489 C1QTNF5Q9BXJ0 243 aa17.55■□□□□ 0.4
NECAB3-213ENST00000488489 GMDSO60547 372 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 ERCC1P07992 297 aaPredicted RBP17.54■□□□□ 0.4
NECAB3-213ENST00000488489 THBS4P35443 961 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 ZNF92Q03936 586 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 EXOSC2Q13868 293 aaKnown RBP17.54■□□□□ 0.4
NECAB3-213ENST00000488489 CLLU1Q5K131 121 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 COLCA1Q6ZS62 124 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 SEM1Q6ZVN7 128 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 PAQR4Q8N4S7 273 aaPredicted RBP17.54■□□□□ 0.4
NECAB3-213ENST00000488489 OR52I2Q8NH67 350 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 GAL3ST1Q99999 423 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 CHST5Q9GZS9 411 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 BEX1Q9HBH7 125 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 GGT3PA6NGU5 568 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 RRP8O43159 456 aaKnown RBP17.54■□□□□ 0.4
NECAB3-213ENST00000488489 MPC2O95563 127 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 CCNOP22674 350 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 IGHV1-2P23083 117 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 ARR3P36575 388 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 MNDAP41218 407 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 AP3S2P59780 193 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 NSUN5P2Q63ZY6 315 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 SFRP4Q6FHJ7 346 aaPredicted RBP17.54■□□□□ 0.4
NECAB3-213ENST00000488489 NLRC3Q7RTR2 1065 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 SEMA6DQ8NFY4 1073 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 NKIRAS2Q9NYR9 191 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 UBQLN2Q9UHD9 624 aa17.54■□□□□ 0.4
NECAB3-213ENST00000488489 NCOR2Q9Y618 2525 aa17.53■□□□□ 0.4
NECAB3-213ENST00000488489 A0A1B0GUH1 482 aa17.53■□□□□ 0.4
NECAB3-213ENST00000488489 C5orf49A4QMS7 147 aa17.53■□□□□ 0.4
NECAB3-213ENST00000488489 CRYABP02511 175 aaKnown RBP17.53■□□□□ 0.4
NECAB3-213ENST00000488489 HCKP08631 526 aa17.53■□□□□ 0.4
NECAB3-213ENST00000488489 GABRA1P14867 456 aa17.53■□□□□ 0.4
NECAB3-213ENST00000488489 PSMB1P20618 241 aaKnown RBP17.53■□□□□ 0.4
NECAB3-213ENST00000488489 QRFPP83859 136 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms