RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 IRF2P14316 349 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 RPS2P15880 293 aaKnown RBP11.84□□□□□ -0.51
COL9A2-208ENST00000488463 ADRA2CP18825 462 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 SRP14P37108 136 aaKnown RBP11.84□□□□□ -0.51
COL9A2-208ENST00000488463 SRSF2Q01130 221 aaKnown RBP11.84□□□□□ -0.51
COL9A2-208ENST00000488463 ZNF85Q03923 595 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 OCLNQ16625 522 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 ZNF829Q3KNS6 432 aaPredicted RBP11.84□□□□□ -0.51
COL9A2-208ENST00000488463 TEX36Q5VZQ5 186 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 C1QL2Q7Z5L3 287 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 FAM90A1Q86YD7 464 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 ELMOD2Q8IZ81 293 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 OR2T27Q8NH04 317 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 OR8S1Q8NH09 359 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 ITFG2Q969R8 447 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 NEIL1Q96FI4 390 aaPredicted RBP11.84□□□□□ -0.51
COL9A2-208ENST00000488463 TBX5Q99593 518 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 R4GMQ9 66 aa11.84□□□□□ -0.51
COL9A2-208ENST00000488463 C3orf80F5H4A9 247 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 ATP6V1B1P15313 513 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 MAP2K3P46734 347 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 IL5RAQ01344 420 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 PAX8Q06710 450 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 MZT1Q08AG7 82 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 SNCBQ16143 134 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 KRTAP24-1Q3LI83 254 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 ESCO2Q56NI9 601 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 WDR25Q64LD2 544 aaPredicted RBP11.83□□□□□ -0.52
COL9A2-208ENST00000488463 SFRP4Q6FHJ7 346 aaPredicted RBP11.83□□□□□ -0.52
COL9A2-208ENST00000488463 ZBTB49Q6ZSB9 765 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 RHOXF1Q8NHV9 184 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 RORBQ92753 470 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 RFKQ969G6 155 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 SSBP3Q9BWW4 388 aaPredicted RBP11.83□□□□□ -0.52
COL9A2-208ENST00000488463 C7orf69Q9H7B7 122 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 MOB1AQ9H8S9 216 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 OR52A1Q9UKL2 312 aa11.83□□□□□ -0.52
COL9A2-208ENST00000488463 ZNF816-ZNF321PA0A0X1KG74 233 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 OOEPA6NGQ2 149 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 METTL15A6NJ78 407 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 SRRM5B3KS81 715 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 LOC110117498-PIK3R3F6TDL0 507 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 CDIPTO14735 213 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 SULT1C4O75897 302 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 AMY2BP19961 511 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 CCL1P22362 96 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 GNALP38405 381 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 MTNR1AP48039 350 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 PITPNBP48739 271 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 KLF17Q5JT82 389 aaPredicted RBP11.82□□□□□ -0.52
COL9A2-208ENST00000488463 ZBTB37Q5TC79 503 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 LIPNQ5VXI9 398 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 TMEM42Q69YG0 159 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 CATSPERDQ86XM0 798 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 ZDHHC23Q8IYP9 409 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 ENTHD1Q8IYW4 607 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 FTMTQ8N4E7 242 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 SEMA6DQ8NFY4 1073 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 LRRC29Q8WV35 223 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 PIGCQ92535 297 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 RPL3LQ92901 407 aaKnown RBP11.82□□□□□ -0.52
COL9A2-208ENST00000488463 SEH1LQ96EE3 360 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 FAM71F1Q96KD3 344 aaPredicted RBP11.82□□□□□ -0.52
COL9A2-208ENST00000488463 MICU1Q9BPX6 476 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 SMURF1Q9HCE7 757 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 ABCB9Q9NP78 766 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 FAM118AQ9NWS6 357 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 IMPAD1Q9NX62 359 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL9A2-208ENST00000488463 SLC22A13Q9Y226 551 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 V9GYS6 101 aa11.82□□□□□ -0.52
COL9A2-208ENST00000488463 IGHV3OR15-7A0A075B7D8 119 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 IGHV2-70DA0A0C4DH43 119 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 A6NLC8 198 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 TMEM210A6NLX4 147 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 ANXA2P2A6NMY6 339 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 C22orf46C9J442 243 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 SLC16A6O15403 523 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 DHRS3O75911 302 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 FAHP16930 419 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 CEACAM21Q3KPI0 293 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 DMRTC1Q5HYR2 192 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 BCL2L15Q5TBC7 163 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 MEDAGQ5VYS4 303 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 PHC2Q8IXK0 858 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 PRSS35Q8N3Z0 413 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 BOLLQ8N9W6 283 aaKnown RBP11.81□□□□□ -0.52
COL9A2-208ENST00000488463 SCCPDHQ8NBX0 429 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 OR10H4Q8NGA5 316 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 OR8B3Q8NGG8 313 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 OR14K1Q8NGZ2 314 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 RNFT2Q96EX2 444 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 OR8B2Q96RD0 313 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 ZNF649Q9BS31 505 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 RTL8AQ9BWD3 113 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 OR51I2Q9H344 312 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 KAAG1Q9UBP8 84 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 PIGLQ9Y2B2 252 aa11.81□□□□□ -0.52
COL9A2-208ENST00000488463 EXOGQ9Y2C4 368 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms