RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TMPRSS11DO60235 418 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 NME2P1O60361 137 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 B3GAT3O94766 335 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 DIRAS3O95661 229 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 OPN1LWP04000 364 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 RPLP2P05387 115 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 CST2P09228 141 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 TACSTD2P09758 323 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 SMIM10L2AP0DMW4 78 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 SMIM10L2BP0DMW5 78 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 IRF2P14316 349 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF708P17019 499 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 FUT1P19526 365 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 BCKDHBP21953 392 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 RPS4Y1P22090 263 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 CD82P27701 267 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 TAGLN2P37802 199 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 TSFMP43897 325 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 GABRA4P48169 554 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 SGSHP51688 502 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 AFF3P51826 1226 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 SLC37A1P57057 533 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 UBE2KP61086 200 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 SP3Q02447 781 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 DMWDQ09019 674 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 RASGEF1BQ0VAM2 473 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 PMPCAQ10713 525 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 FOXF1Q12946 379 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 RAB32Q13637 225 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 ARHGAP19Q14CB8 494 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 TMEM241Q24JQ0 296 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 C2orf76Q3KRA6 126 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 TMEM176BQ3YBM2 270 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 OR4C11Q6IEV9 310 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 ARMC6Q6NXE6 501 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 CLEC2AQ6UVW9 174 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 FBXW12Q6X9E4 464 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF836Q6ZNA1 936 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 FAM220AQ7Z4H9 259 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 ADGRE4PQ86SQ3 457 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 GGNQ86UU5 652 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 AMER3Q8N944 861 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 ADAD2Q8NCV1 583 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 OR4S1Q8NGB4 309 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 STT3BQ8TCJ2 826 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 CASTOR1Q8WTX7 329 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 TMEM230Q96A57 120 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 TMEM159Q96B96 161 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 TVP23CQ96ET8 276 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 ACY3Q96HD9 319 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 GAL3ST4Q96RP7 486 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 NUDT16L1Q9BRJ7 211 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF2Q9BSG1 426 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 PCGF1Q9BSM1 259 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 TCEAL2Q9H3H9 227 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 MSL2Q9HCI7 577 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 AURKAIP1Q9NWT8 199 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 KIAA1456Q9P272 454 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 SLC25A13Q9UJS0 675 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 MEMO1Q9Y316 297 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 PUS1Q9Y606 427 aaKnown RBP eCLIP4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 KCNE3Q9Y6H6 103 aa4.2□□□□□ -1.74
CDC42BPA-213ENST00000488131 VWA8A3KMH1 1905 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 KIAA1549LQ6ZVL6 1849 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 TRAV27A0A087WT01 109 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 A0A087WV48 116 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 TMEM202A6NGA9 273 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 NKX6-3A6NJ46 265 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 DHRS7CA6NNS2 312 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF727A8MUV8 499 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 LEFTY2O00292 366 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 KAT7O95251 611 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 C1orf105O95561 183 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 AGR2O95994 175 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 MAS1P04201 325 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 HSPB1P04792 205 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 UMODP07911 640 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 SRP19P09132 144 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 OR4A8P0C604 315 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 SLC35G6P0C7Q6 338 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 PGA4P0DJD7 388 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 PGA5P0DJD9 388 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 THEGLP0DJG4 465 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 OR13C7P0DN81 318 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 CTSAP10619 480 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 FGF5P12034 268 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 HNF1AP20823 631 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 HMGB2P26583 209 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 RPL12P30050 165 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 P2RY1P47900 373 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 CAMLGP49069 296 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 SPINT3P49223 89 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 PRLHRP49683 370 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 TNFSF10P50591 281 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 SLC25A1P53007 311 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 TMEM33P57088 247 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 KLF3P57682 345 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 BEX3Q00994 111 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 ZNF616Q08AN1 781 aa4.19□□□□□ -1.74
CDC42BPA-213ENST00000488131 PNRC1Q12796 327 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms