RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TMEM236Q5W0B7 351 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 KDM4DQ6B0I6 523 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 FAM131AQ6UXB0 335 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 ZYG11AQ6WRX3 759 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 TCF24Q7RTU0 167 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 BBS7Q8IWZ6 715 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 CDH26Q8IXH8 852 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 CDS1Q92903 461 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 RERGQ96A58 199 aaPredicted RBP0.8□□□□□ -2.28
SMC4-219ENST00000487747 UQCC2Q9BRT2 126 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 MS4A8Q9BY19 250 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 SLC7A5P2Q9GIP4 190 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 PIGUQ9H490 435 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 TREX1Q9NSU2 369 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 TSPAN11A1L157 253 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 WBP4O75554 376 aaKnown RBP0.79□□□□□ -2.28
SMC4-219ENST00000487747 CIB2O75838 187 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 CCNB2O95067 398 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 CPSF4O95639 269 aaKnown RBP0.79□□□□□ -2.28
SMC4-219ENST00000487747 CLTAP09496 248 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 EIF2S2P20042 333 aaKnown RBP0.79□□□□□ -2.28
SMC4-219ENST00000487747 CXCR1P25024 350 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 GTF2E2P29084 291 aaKnown RBP0.79□□□□□ -2.28
SMC4-219ENST00000487747 APLNRP35414 380 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 RFC3P40938 356 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 NBL1P41271 181 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 ACOT2P49753 483 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 OR12D2P58182 307 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 OR2B8PP59922 312 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 RPS15P62841 145 aaKnown RBP0.79□□□□□ -2.28
SMC4-219ENST00000487747 ILKQ13418 452 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 OR1Q1Q15612 314 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 TSC22D1Q15714 1073 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 TRMT5Q32P41 509 aaKnown RBP0.79□□□□□ -2.28
SMC4-219ENST00000487747 LINC00303Q3SY05 128 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 CPTPQ5TA50 214 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 CARD17Q5XLA6 110 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 JAGN1Q8N5M9 183 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 RNF10Q8N5U6 811 aaKnown RBP0.79□□□□□ -2.28
SMC4-219ENST00000487747 LINC00469Q8N7U9 141 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 OR4C13Q8NGP0 309 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 YIPF5Q969M3 257 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 PRRC1Q96M27 445 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 GPR21Q99679 349 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 CCDC77Q9BR77 488 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 SFXN3Q9BWM7 321 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 CALN1Q9BXU9 219 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 DSN1Q9H410 356 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 TMEM185BQ9H7F4 350 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 BEX1Q9HBH7 125 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 CA10Q9NS85 328 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 HPCAL4Q9UM19 191 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 GBF1Q92538 1859 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 NINLQ9Y2I6 1382 aa0.79□□□□□ -2.28
SMC4-219ENST00000487747 IGHV6-1A0A0B4J1U7 121 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 TMEM72A0PK05 275 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 ISPDA4D126 451 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 IZUMO1RA6ND01 250 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 C15orf65H3BRN8 121 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 CACNG3O60359 315 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 HLA-HP01893 362 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 OR5AC1P0C628 307 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 RAB5AP20339 215 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 CSRP1P21291 193 aaKnown RBP0.78□□□□□ -2.28
SMC4-219ENST00000487747 IL3RAP26951 378 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 OR1G1P47890 313 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 UQCRFS1P47985 274 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 SERPINB8P50452 374 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 RAB7AP51149 207 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 RGS8P57771 180 aaPredicted RBP0.78□□□□□ -2.28
SMC4-219ENST00000487747 ZNF141Q15928 474 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 HADHQ16836 314 aaKnown RBP0.78□□□□□ -2.28
SMC4-219ENST00000487747 MRPL2Q5T653 305 aaKnown RBP0.78□□□□□ -2.28
SMC4-219ENST00000487747 STEAP4Q687X5 459 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 Q6ZSA8 131 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 Q6ZSR6 202 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 FA2HQ7L5A8 372 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 APRG1Q8IVJ8 170 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 VKORC1L1Q8N0U8 176 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 GABRG1Q8N1C3 465 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 PQLC3Q8N755 202 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 ZFP62Q8NB50 900 aaPredicted RBP0.78□□□□□ -2.28
SMC4-219ENST00000487747 OR4M2Q8NGB6 313 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 OR52E5Q8NH55 327 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 OR51F2Q8NH61 342 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 ZNF420Q8TAQ5 688 aaPredicted RBP0.78□□□□□ -2.28
SMC4-219ENST00000487747 OR2V2Q96R30 315 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 PANX1Q96RD7 426 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 PLIN2Q99541 437 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 CHP1Q99653 195 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 AGMATQ9BSE5 352 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 GEMIN7Q9H840 131 aaKnown RBP0.78□□□□□ -2.28
SMC4-219ENST00000487747 SND1-IT1Q9HBX3 110 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 FAM60AQ9NP50 221 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 SAR1BQ9Y6B6 198 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 UBN2Q6ZU65 1347 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 INSRP06213 1382 aa0.78□□□□□ -2.28
SMC4-219ENST00000487747 STRCP1A6NGW2 1772 aa0.78□□□□□ -2.29
SMC4-219ENST00000487747 D6RAR5 112 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 LINC01619G3V211 115 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms