RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 NUDT16L1Q9BRJ7 211 aaKnown RBP13.18□□□□□ -0.3
GABPA-203ENST00000487266 H2AFY2Q9P0M6 372 aaPredicted RBP13.18□□□□□ -0.3
GABPA-203ENST00000487266 TRAV38-1A0A0B4J264 116 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 TRAV40A0A0B4J280 105 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 ANXA2P2A6NMY6 339 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 CST4P01036 141 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 IGLV3-1P01715 115 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 TTRP02766 147 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 RIDAP52758 137 aaKnown RBP13.17□□□□□ -0.3
GABPA-203ENST00000487266 ZNF829Q3KNS6 432 aaPredicted RBP13.17□□□□□ -0.3
GABPA-203ENST00000487266 TEX36Q5VZQ5 186 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 DEGS2Q6QHC5 323 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 BTNL3Q6UXE8 466 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 KCTD8Q6ZWB6 473 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 GID4Q8IVV7 300 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 ZDHHC23Q8IYP9 409 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 FAM216BQ8N7L0 139 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 SIGLECL1Q8N7X8 197 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 ASB17Q8WXJ9 295 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 OR5P3Q8WZ94 311 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 UBE2FQ969M7 185 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 ZNF48Q96MX3 618 aaPredicted RBP13.17□□□□□ -0.3
GABPA-203ENST00000487266 DUX5Q96PT3 197 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 MICU1Q9BPX6 476 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 RBM4BQ9BQ04 359 aaKnown RBP13.17□□□□□ -0.3
GABPA-203ENST00000487266 RTL8AQ9BWD3 113 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 TLNRD1Q9H1K6 362 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 WDR13Q9H1Z4 485 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 NUFIP1Q9UHK0 495 aaKnown RBP13.17□□□□□ -0.3
GABPA-203ENST00000487266 ENOPH1Q9UHY7 261 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 MRM2Q9UI43 246 aaKnown RBP13.17□□□□□ -0.3
GABPA-203ENST00000487266 TMEM14AQ9Y6G1 99 aa13.17□□□□□ -0.3
GABPA-203ENST00000487266 A0A0U1RQV5 110 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 H3BSH0 61 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 TMPRSS2O15393 492 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 RPP14O95059 124 aaKnown RBP13.16□□□□□ -0.3
GABPA-203ENST00000487266 ALPLP05186 524 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 SELLP14151 372 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 FAHP16930 419 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 GPM6AP51674 278 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 FGF12P61328 243 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 IL5RAQ01344 420 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 ZIK1Q3SY52 487 aaPredicted RBP13.16□□□□□ -0.3
GABPA-203ENST00000487266 WDR38Q5JTN6 314 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 GALNT4Q8N4A0 578 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 FTMTQ8N4E7 242 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 ZDHHC22Q8N966 263 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 RNF170Q96K19 258 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 CCL13Q99616 98 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 SUCNR1Q9BXA5 334 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 RNPEPL1Q9HAU8 725 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 SNTG1Q9NSN8 517 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 CLN6Q9NWW5 311 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 NUP50Q9UKX7 468 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 MPC1Q9Y5U8 109 aa13.16□□□□□ -0.3
GABPA-203ENST00000487266 A0A0A6YYJ9 748 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 ZNF816-ZNF321PA0A0X1KG74 233 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 KIR2DS1A0A191URI9 304 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 MDFIC2A0A1B0GVS7 189 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 A0A1W2PQL4 384 aaPredicted RBP13.15□□□□□ -0.3
GABPA-203ENST00000487266 A6NIN4 97 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 ZNF670-ZNF695F2Z2N8 137 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 LOC110117498-PIK3R3F6TDL0 507 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 AKR7A2O43488 359 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 ZNF254O75437 659 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 RHBDL1O75783 438 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 SFTPBP07988 381 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 CPT2P23786 658 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 HTR1FP30939 366 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 DCTDP32321 178 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 KCNJ8Q15842 424 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 BCL2L15Q5TBC7 163 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 USP43Q70EL4 1123 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 SCCPDHQ8NBX0 429 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 OR10H4Q8NGA5 316 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 OR5T2Q8NGG2 359 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 EME1Q96AY2 570 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 UPRTQ96BW1 309 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 HAO2Q9NYQ3 351 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 ERVK-18Q9QC07 812 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 AASSQ9UDR5 926 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 WARS2Q9UGM6 360 aaKnown RBP13.15□□□□□ -0.3
GABPA-203ENST00000487266 ZNF391Q9UJN7 358 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 SLC22A13Q9Y226 551 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 PIGLQ9Y2B2 252 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 R4GMQ9 66 aa13.15□□□□□ -0.3
GABPA-203ENST00000487266 SRRM5B3KS81 715 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 ZNF732B4DXR9 585 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 P2RY10O00398 339 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 DVL1O14640 695 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
GABPA-203ENST00000487266 AMY2BP19961 511 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 MAP2K3P46734 347 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 ACTG1P63261 375 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 EGR3Q06889 387 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 SNCBQ16143 134 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 ODF4Q2M2E3 257 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 TUSC1Q2TAM9 212 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 BRD3OSQ6XYD6 125 aa13.14□□□□□ -0.31
GABPA-203ENST00000487266 CBR4Q8N4T8 237 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms