RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 HIST1H1DP16402 221 aaKnown RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 AMY2BP19961 511 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 KLK2P20151 261 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 CXCR1P25024 350 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 HOXA6P31267 233 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 OR3A2P47893 321 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 CEBPGP53567 150 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 DLK1P80370 383 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 FOXO1Q12778 655 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 HIKESHIQ53FT3 197 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 GGNBP1Q5YKI7 109 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 PLXDC2Q6UX71 529 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 DPPA2Q7Z7J5 298 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 APCDD1LQ8NCL9 501 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 FNDC9Q8TBE3 224 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 FAM213BQ8TBF2 198 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 RHBDD1Q8TEB9 315 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 HPSE2Q8WWQ2 592 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 FAM3CQ92520 227 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 MRPL24Q96A35 216 aaKnown RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 RERGQ96A58 199 aaPredicted RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 SLC25A36Q96CQ1 311 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 BANF2Q9H503 90 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 PLEKHA2Q9HB19 425 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 RNF186Q9NXI6 227 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 SLC17A4Q9Y2C5 497 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 COA3Q9Y2R0 106 aaPredicted RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 STRAPQ9Y3F4 350 aaKnown RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 COL4A2P08572 1712 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 A0A087WWC5 75 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 OTOL1A6NHN0 477 aaPredicted RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 H0YL77 283 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 ADAM10O14672 748 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 MPIG6BO95866 241 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 ADH1CP00326 375 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 BGLAPP02818 100 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 BCKDHBP21953 392 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 RBMXP38159 391 aaKnown RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 P2RY1P47900 373 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 RPL27P61353 136 aaKnown RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 RNF4P78317 190 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 AGBL4Q5VU57 503 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 C1orf140Q5VVS0 124 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 TMEM182Q6ZP80 229 aaPredicted RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 DCXRQ7Z4W1 244 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 C5orf24Q7Z6I8 188 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 LINC00346Q8IVM7 164 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 HSD17B11Q8NBQ5 300 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 OR14K1Q8NGZ2 314 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 OR10G6Q8NH81 332 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 OR5R1Q8NH85 324 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 C16orf52Q8NHV5 167 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 ZNF519Q8TB69 540 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 M1APQ8TC57 530 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 SLC22A18Q96BI1 424 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 HIST1H2BLQ99880 126 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 ZFYVE21Q9BQ24 234 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 ATG101Q9BSB4 218 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 FOXQ1Q9C009 403 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 SLC25A31Q9H0C2 315 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 ZBP1Q9H171 429 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 SERGEFQ9UGK8 458 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 SRPK3Q9UPE1 567 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 B3GALT5Q9Y2C3 310 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 RCL1Q9Y2P8 373 aaKnown RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 HEBP2Q9Y5Z4 205 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 A0A1W2PP11 408 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 RBFOX3A6NFN3 312 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 TLCD2A6NGC4 264 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 A8MVM7 634 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 C9J4A7 227 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 WISP1O95388 367 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 ZNF93P35789 620 aaPredicted RBP9.41□□□□□ -0.9
CCDC171-208ENST00000486641 AFF3P51826 1226 aaKnown RBP9.41□□□□□ -0.9
CCDC171-208ENST00000486641 ZNF117Q03924 483 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 C4orf17Q53FE4 359 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 AKR1C8PQ5T2L2 129 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 FNDC7Q5VTL7 733 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 TCEAL6Q6IPX3 200 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 GLIPR1L1Q6UWM5 242 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 ZNF664Q8N3J9 261 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 EMG1Q92979 244 aaKnown RBP9.41□□□□□ -0.9
CCDC171-208ENST00000486641 ARHGAP5-AS1Q96IT6 56 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 PPP1R14DQ9NXH3 145 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 EHFQ9NZC4 300 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 VSX1Q9NZR4 365 aaPredicted RBP9.41□□□□□ -0.9
CCDC171-208ENST00000486641 FBLN5Q9UBX5 448 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 RFNGQ9Y644 331 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 C5orf42Q9H799 3197 aa9.41□□□□□ -0.9
CCDC171-208ENST00000486641 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 SMCO3A2RU48 225 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 MBPP02686 304 aaPredicted RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 CXCL10P02778 98 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 HCKP08631 526 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 OR5H8P0DN80 308 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 DHPSP49366 369 aaPredicted RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 RAB38P57729 211 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 CSNK2A1P68400 391 aaPredicted RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 NHLH2Q02577 135 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms