RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 SLC35A2P78381 396 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 MFGE8Q08431 387 aaPredicted RBP7.02□□□□□ -1.29
SF3A1-208ENST00000485618 PRDX4Q13162 271 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 GPR50Q13585 617 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 CNN3Q15417 329 aaKnown RBP7.02□□□□□ -1.29
SF3A1-208ENST00000485618 SPHARQ15513 63 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 TRAM1Q15629 374 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 ODF4Q2M2E3 257 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 CEACAM21Q3KPI0 293 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 WDR38Q5JTN6 314 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 MOB3CQ70IA8 216 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 KRT74Q7RTS7 529 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 PRSS48Q7RTY5 328 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF573Q86YE8 665 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 KRTAP1-3Q8IUG1 177 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 SERPINA12Q8IW75 414 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 MS4A15Q8N5U1 240 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 NANOGP1Q8N7R0 232 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 OR13C3Q8NGS6 347 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF671Q8TAW3 534 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 FCGR1BQ92637 280 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 RNF170Q96K19 258 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 MEGF10Q96KG7 1140 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 Q96MF0 132 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 ISG20L2Q9H9L3 353 aaKnown RBP7.02□□□□□ -1.29
SF3A1-208ENST00000485618 FKBP14Q9NWM8 211 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 FRRS1LQ9P0K9 344 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF319Q9P2F9 582 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 DHDHQ9UQ10 334 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF281Q9Y2X9 895 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 RHBDD3Q9Y3P4 386 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 LRRC42Q9Y546 428 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 LOC107986453A0A1B0GWG9 222 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 ANKRD61A6NGH8 418 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 OR4C45A6NMZ5 311 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF850A8MQ14 1090 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 F5H5P2 479 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 OGG1O15527 345 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 NDUFA2O43678 99 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 CDC14BO60729 498 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 LY6G6DO95868 133 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 IGLV3-1P01715 115 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 HPXP02790 462 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 HLA-DPB1P04440 258 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 GRPP07492 148 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 USF1P22415 310 aaPredicted RBP7.01□□□□□ -1.29
SF3A1-208ENST00000485618 PSMA1P25786 263 aaKnown RBP7.01□□□□□ -1.29
SF3A1-208ENST00000485618 C21orf33P30042 268 aaPredicted RBP7.01□□□□□ -1.29
SF3A1-208ENST00000485618 GATA4P43694 442 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 FUT6P51993 359 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 PPP3R1P63098 170 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 ACSM1Q08AH1 577 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 MED22Q15528 200 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF181Q2M3W8 571 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 YIF1BQ5BJH7 314 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 OR2G6Q5TZ20 316 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 PLCXD3Q63HM9 321 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 LAIR2Q6ISS4 152 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 Q6ZR03 302 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 Q6ZSR3 168 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 MUC20Q8N307 709 aaPredicted RBP7.01□□□□□ -1.29
SF3A1-208ENST00000485618 PRSS35Q8N3Z0 413 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 SPICQ8N5J4 248 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF525Q8N782 197 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 OR10AD1Q8NGE0 317 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 C10orf105Q8TEF2 133 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 TSEN15Q8WW01 171 aaKnown RBP7.01□□□□□ -1.29
SF3A1-208ENST00000485618 ITLN1Q8WWA0 313 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 OR5P3Q8WZ94 311 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 GHSRQ92847 366 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 UFD1Q92890 307 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 SPSB1Q96BD6 273 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 SMIM19Q96E16 107 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 COX4I2Q96KJ9 171 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 LYZL4Q96KX0 146 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 REG4Q9BYZ8 158 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 GCM1Q9NP62 436 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 ISYNA1Q9NPH2 558 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF275Q9NSD4 429 aaPredicted RBP7.01□□□□□ -1.29
SF3A1-208ENST00000485618 TMEM106BQ9NUM4 274 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 ERVK-18Q9QC07 812 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 RNF7Q9UBF6 113 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 CLEC2DQ9UHP7 191 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 PCDHB10Q9UN67 800 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 POLDIP2Q9Y2S7 368 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 V9GYS6 101 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 ACANP16112 2415 aa7.01□□□□□ -1.29
SF3A1-208ENST00000485618 A0A1B0GTI1 187 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 hCG_1807616A0A1W2PRN6 198 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 LRP5LA4QPB2 252 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 KIAA1324LA8MWY0 1029 aaPredicted RBP7□□□□□ -1.29
SF3A1-208ENST00000485618 H7C1Q1 480 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 SMAD7O15105 426 aaKnown RBP7□□□□□ -1.29
SF3A1-208ENST00000485618 MLNRO43193 412 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 NDUFS7O75251 213 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 ZFPL1O95159 310 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 TNFAIP8O95379 198 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 FSTL3O95633 263 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 FAHP16930 419 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 CELP19835 753 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms