RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-210	ENST00000485247	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.19	□□□□□ -1.74
PTPN4-210	ENST00000485247	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.19	□□□□□ -1.74
PTPN4-210	ENST00000485247	NDUFAF1	Q9Y375	327 aa		4.19	□□□□□ -1.74
PTPN4-210	ENST00000485247	PSMB11	A5LHX3	300 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	GMNC	A6NCL1	334 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	OR6C6	A6NF89	314 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	FAM90A8P	A6NJQ4	464 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247		F5H697	171 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	CCL24	O00175	119 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	RHBDL1	O75783	438 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	PTBP3	O95758	552 aa	Known RBP	4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	KIT	P10721	976 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	NR2C1	P13056	603 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	PTMS	P20962	102 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	PEX2	P28328	305 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	GGT2	P36268	569 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	TGM4	P49221	684 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	CLNS1A	P54105	237 aa	Known RBP	4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	GMFB	P60983	142 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	GK2	Q14410	553 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	PCLAF	Q15004	111 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	DGUOK	Q16854	277 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	DEFB136	Q30KP8	78 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	C9orf152	Q5JTZ5	239 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	C16orf89	Q6UX73	402 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	FOXL2NB	Q6ZUU3	175 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	FAM185A	Q8N0U4	392 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	OSR2	Q8N2R0	312 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	SLC26A10	Q8NG04	563 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	MOSPD2	Q8NHP6	518 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	BBS10	Q8TAM1	723 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	BCAS4	Q8TDM0	211 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	VPS33A	Q96AX1	596 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	SLCO4A1	Q96BD0	722 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	ITCH	Q96J02	903 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	MCHR1	Q99705	422 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	ADAT1	Q9BUB4	502 aa	Known RBP	4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	HEXA-AS1	Q9H8Q6	139 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	TPT1P8	Q9HAU6	139 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	ELL3	Q9HB65	397 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	BCL2L10	Q9HD36	194 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	VNN3	Q9NY84	501 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	STX18	Q9P2W9	335 aa	Known RBP	4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	KCNG2	Q9UJ96	466 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	ZNF391	Q9UJN7	358 aa		4.18	□□□□□ -1.74
PTPN4-210	ENST00000485247	TRIM64C	A6NLI5	447 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	CPSF4L	A6NMK7	179 aa	Known RBP	4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	C5orf58	C9J3I9	102 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247		M0R3H8	397 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	RFXANK	O14593	260 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	RER1	O15258	196 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	TRIAP1	O43715	76 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	CHP2	O43745	196 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	GMDS	O60547	372 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	IFNA6	P05013	189 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	ARG1	P05089	322 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	ALDOC	P09972	364 aa	Known RBP	4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	ETS2	P15036	469 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	FUT1	P19526	365 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	IL12A	P29459	219 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	SLC6A1	P30531	599 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	CCT5	P48643	541 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	UFM1	P61960	85 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	SLC34A1	Q06495	639 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	LRRC74A	Q0VAA2	488 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	AQP6	Q13520	282 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	GTDC1	Q4AE62	458 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	CCDC92	Q53HC0	331 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	LDLRAD2	Q5SZI1	272 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	FAM27D1	Q5T7N8	215 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	DHRS4L2	Q6PKH6	230 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	PGAP1	Q75T13	922 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	ARMC8	Q8IUR7	673 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	ZNF695	Q8IW36	515 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	CAPSL	Q8WWF8	208 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	MALSU1	Q96EH3	234 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	RNFT2	Q96EX2	444 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	CDRT15	Q96T59	188 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	WAC	Q9BTA9	647 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	ALG12	Q9BV10	488 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	SLC22A4	Q9H015	551 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	TXNIP	Q9H3M7	391 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	RAD21L1	Q9H4I0	556 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	MEPE	Q9NQ76	525 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	C19orf12	Q9NSK7	152 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	THUMPD1	Q9NXG2	353 aa	Known RBP	4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	SLC13A4	Q9UKG4	626 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	NOP16	Q9Y3C1	178 aa	Known RBP	4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	HILPDA	Q9Y5L2	63 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	LYVE1	Q9Y5Y7	322 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	MUC4	Q99102	2169 aa		4.17	□□□□□ -1.74
PTPN4-210	ENST00000485247	IGLV1-36	A0A0B4J1U3	117 aa		4.16	□□□□□ -1.74
PTPN4-210	ENST00000485247	CD300LB	A8K4G0	201 aa		4.16	□□□□□ -1.74
PTPN4-210	ENST00000485247		H7C1C5	153 aa		4.16	□□□□□ -1.74
PTPN4-210	ENST00000485247		M0QYG6	137 aa		4.16	□□□□□ -1.74
PTPN4-210	ENST00000485247	DEDD	O75618	318 aa		4.16	□□□□□ -1.74
PTPN4-210	ENST00000485247	LYPD3	O95274	346 aa		4.16	□□□□□ -1.74
PTPN4-210	ENST00000485247	ANP32D	O95626	131 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms