RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 A8MWL6 223 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 DNALI1O14645 258 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 CASQ2O14958 399 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 HMMRO75330 724 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 SCO1O75880 301 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 LSM8O95777 96 aaKnown RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 HPRT1P00492 218 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 TPM2P07951 284 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 ERCC1P07992 297 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 THRAP10827 490 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 CSRP1P21291 193 aaKnown RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 STOMP27105 288 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 GGT2P36268 569 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 ZNF121P58317 390 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 FMODQ06828 376 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 CUL2Q13617 745 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 TPBGQ13641 420 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 IL18Q14116 193 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 CCL15Q16663 113 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 ZNF829Q3KNS6 432 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 ALKBH6Q3KRA9 238 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 TPTE2P1Q5T6R2 138 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 TWF2Q6IBS0 349 aaKnown RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 MICU2Q8IYU8 434 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 PQLC3Q8N755 202 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 ENKURQ8TC29 256 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 CDS1Q92903 461 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 BTN2A3PQ96KV6 586 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 OPALINQ96PE5 141 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 XPO6Q96QU8 1125 aaKnown RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 MTG1Q9BT17 334 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 CALN1Q9BXU9 219 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 ACTR3CQ9C0K3 210 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 ABCG5Q9H222 651 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 EXO5Q9H790 373 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 GEMIN7Q9H840 131 aaKnown RBP0.92□□□□□ -2.26
SCAF11-207ENST00000484275 RGS18Q9NS28 235 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 SLC39A1Q9NY26 324 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 GCNT4Q9P109 453 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 CLN8Q9UBY8 286 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 INSRP06213 1382 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 PLEKHG2Q9H7P9 1386 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 TENM3Q9P273 2699 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 GOLGA6L4A6NEF3 574 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 M0R3G1 203 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 WRBO00258 174 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 EIF3HO15372 352 aaKnown RBP eCLIP0.91□□□□□ -2.26
SCAF11-207ENST00000484275 CD160O95971 181 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 NRASP01111 189 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 HRASP01112 189 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 KRASP01116 189 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 IGHMP01871 453 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 HBE1P02100 147 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 CTSGP08311 255 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 CLTAP09496 248 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 GSTM3P21266 225 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 USF1P22415 310 aaPredicted RBP0.91□□□□□ -2.26
SCAF11-207ENST00000484275 MYL9P24844 172 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 HTR1DP28221 377 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 RAB7AP51149 207 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 BEX5Q5H9J7 111 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 TMEM53Q6P2H8 277 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 TMEM220Q6QAJ8 160 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 EIF3MQ7L2H7 374 aaKnown RBP0.91□□□□□ -2.26
SCAF11-207ENST00000484275 CNPY4Q8N129 248 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 JAGN1Q8N5M9 183 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 UBAC2Q8NBM4 344 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 CCDC148Q8NFR7 591 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 DCAKDQ8WVC6 231 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 NRGNQ92686 78 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 RBPMSQ93062 196 aaKnown RBP0.91□□□□□ -2.26
SCAF11-207ENST00000484275 RERGQ96A58 199 aaPredicted RBP0.91□□□□□ -2.26
SCAF11-207ENST00000484275 C9orf72Q96LT7 481 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 JSRP1Q96MG2 331 aaPredicted RBP0.91□□□□□ -2.26
SCAF11-207ENST00000484275 PANX1Q96RD7 426 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 GPR21Q99679 349 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 BPIFA3Q9BQP9 254 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 C11orf70Q9BRQ4 267 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 UQCC2Q9BRT2 126 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 TOLLIPQ9H0E2 274 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 AUNIPQ9H7T9 357 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 VPS37BQ9H9H4 285 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 BEX1Q9HBH7 125 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 MRPS30Q9NP92 439 aaKnown RBP0.91□□□□□ -2.26
SCAF11-207ENST00000484275 AGPAT4Q9NRZ5 378 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 CLN6Q9NWW5 311 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 PTTG3PQ9NZH4 202 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 ZNF337Q9Y3M9 751 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 HES2Q9Y543 173 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 MIA3Q5JRA6 1907 aa0.91□□□□□ -2.26
SCAF11-207ENST00000484275 A0A1W2PRD5 423 aa0.9□□□□□ -2.27
SCAF11-207ENST00000484275 TSPAN11A1L157 253 aa0.9□□□□□ -2.27
SCAF11-207ENST00000484275 IZUMO1RA6ND01 250 aa0.9□□□□□ -2.27
SCAF11-207ENST00000484275 OR2AG2A6NM03 316 aa0.9□□□□□ -2.27
SCAF11-207ENST00000484275 CENPBD1B2RD01 187 aa0.9□□□□□ -2.27
SCAF11-207ENST00000484275 D6RAR5 112 aa0.9□□□□□ -2.27
SCAF11-207ENST00000484275 NME4O00746 187 aa0.9□□□□□ -2.27
SCAF11-207ENST00000484275 SLC9A3R1O14745 358 aaPredicted RBP0.9□□□□□ -2.27
SCAF11-207ENST00000484275 RAD1O60671 282 aa0.9□□□□□ -2.27
SCAF11-207ENST00000484275 HLA-HP01893 362 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms