RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ZNF154Q13106 437 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 FAM166AQ6J272 317 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 COMMD2Q86X83 199 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 ZDHHC23Q8IYP9 409 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 PRSS35Q8N3Z0 413 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 OR2G2Q8NGZ5 317 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 PPP1R14AQ96A00 147 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 PELI1Q96FA3 418 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 GAL3ST1Q99999 423 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 RTL8AQ9BWD3 113 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 VCX3BQ9H321 246 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 ENPP5Q9UJA9 477 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 GTF2A1LQ9UNN4 478 aa13.35□□□□□ -0.27
UPF3A-208ENST00000484246 NSD1Q96L73 2696 aaPredicted RBP13.34□□□□□ -0.27
UPF3A-208ENST00000484246 OR5B21A6NL26 309 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 ISG15P05161 165 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 LIMS3P0CW19 117 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 LIMS4P0CW20 117 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 IRF2P14316 349 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 KIR3DL2P43630 455 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 DVL1P1P54792 670 aaPredicted RBP13.34□□□□□ -0.27
UPF3A-208ENST00000484246 HNRNPA0Q13151 305 aaKnown RBP13.34□□□□□ -0.27
UPF3A-208ENST00000484246 LAIR2Q6ISS4 152 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 Q71RC1 249 aaPredicted RBP13.34□□□□□ -0.27
UPF3A-208ENST00000484246 THAP5Q7Z6K1 395 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 OR1M1Q8NGA1 313 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 C10orf35Q96D05 121 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 C4orf36Q96KX1 117 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 FGF23Q9GZV9 251 aaPredicted RBP13.34□□□□□ -0.27
UPF3A-208ENST00000484246 NARFLQ9H6Q4 476 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 PLCXD1Q9NUJ7 323 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 CNOT2Q9NZN8 540 aaKnown RBP13.34□□□□□ -0.27
UPF3A-208ENST00000484246 RNF7Q9UBF6 113 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 DIMT1Q9UNQ2 313 aaKnown RBP13.34□□□□□ -0.27
UPF3A-208ENST00000484246 HIVEP2P31629 2446 aa13.34□□□□□ -0.27
UPF3A-208ENST00000484246 A0A1B0GVI7 797 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 ISPDA4D126 451 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 ZNF850A8MQ14 1090 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 A8MXK9 166 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 FAM157AC9JC47 383 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 INAFM1C9JVW0 142 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 P2RY10O00398 339 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 CYB5R3P00387 301 aaPredicted RBP13.33□□□□□ -0.28
UPF3A-208ENST00000484246 MSMBP08118 114 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 RPSAP08865 295 aaKnown RBP13.33□□□□□ -0.28
UPF3A-208ENST00000484246 FAHP16930 419 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 ZNF12P17014 697 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 TGM4P49221 684 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 AQP4P55087 323 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 CEACAM21Q3KPI0 293 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 ZNF404Q494X3 552 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 LHFPL3Q86UP9 236 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 C11orf53Q8IXP5 236 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 KLHL36Q8N4N3 616 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 OR51F2Q8NH61 342 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 PPP1R3EQ9H7J1 279 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 PATZ1Q9HBE1 687 aaKnown RBP13.33□□□□□ -0.28
UPF3A-208ENST00000484246 TRIM36Q9NQ86 728 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 YAE1D1Q9NRH1 226 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 UFSP2Q9NUQ7 469 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 FRRS1LQ9P0K9 344 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 KCNS2Q9ULS6 477 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 PIGLQ9Y2B2 252 aa13.33□□□□□ -0.28
UPF3A-208ENST00000484246 FN1P02751 2386 aaKnown RBP13.33□□□□□ -0.28
UPF3A-208ENST00000484246 ABCA1O95477 2261 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 TLN2Q9Y4G6 2542 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 PPIAL4EA0A075B759 164 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 TRAV20A0A0B4J274 112 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 IGHV3-64DA0A0J9YX35 117 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 LOC107986453A0A1B0GWG9 222 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 EFCAB10A6NFE3 127 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 A6NLC8 198 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 OR4C45A6NMZ5 311 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 CEACAM18A8MTB9 384 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 PPIAL4DF5H284 164 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 J3QLW9 94 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 LGALS8O00214 317 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 SYT7O43581 403 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 LMX1BO60663 402 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 LHBP01229 141 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 PPIAL4FP0DN26 164 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 ZNF19P17023 458 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 PCMT1P22061 227 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 THBS2P35442 1172 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 PSMB10P40306 273 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 NANOS3P60323 173 aaKnown RBP13.32□□□□□ -0.28
UPF3A-208ENST00000484246 GNG3P63215 75 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 CLVS2Q5SYC1 327 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 TMEM244Q5VVB8 128 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 WDR82Q6UXN9 313 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 GCSAMQ8N6F7 178 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 OR5A2Q8NGI9 324 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 OR10Z1Q8NGY1 313 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 RPS4Y2Q8TD47 263 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 PIGCQ92535 297 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 TMEM165Q9HC07 324 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 C1orf123Q9NWV4 160 aa13.32□□□□□ -0.28
UPF3A-208ENST00000484246 POLR3KQ9Y2Y1 108 aaPredicted RBP13.32□□□□□ -0.28
UPF3A-208ENST00000484246 CAB39Q9Y376 341 aaPredicted RBP13.32□□□□□ -0.28
UPF3A-208ENST00000484246 EXOSC1Q9Y3B2 195 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms