RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZNF511Q8NB15 262 aa10.41□□□□□ -0.74
UBR4-213ENST00000483922 OR4S1Q8NGB4 309 aa10.41□□□□□ -0.74
UBR4-213ENST00000483922 REEP6Q96HR9 211 aa10.41□□□□□ -0.74
UBR4-213ENST00000483922 NKX3-1Q99801 234 aaPredicted RBP10.41□□□□□ -0.74
UBR4-213ENST00000483922 SIKE1Q9BRV8 207 aa10.41□□□□□ -0.74
UBR4-213ENST00000483922 FAM234AQ9H0X4 552 aa10.41□□□□□ -0.74
UBR4-213ENST00000483922 DNTTIP1Q9H147 329 aa10.41□□□□□ -0.74
UBR4-213ENST00000483922 EGLN3Q9H6Z9 239 aa10.41□□□□□ -0.74
UBR4-213ENST00000483922 CENPMQ9NSP4 180 aa10.41□□□□□ -0.74
UBR4-213ENST00000483922 ZNF222Q9UK12 451 aa10.41□□□□□ -0.74
UBR4-213ENST00000483922 SF3B6Q9Y3B4 125 aaKnown RBP10.41□□□□□ -0.74
UBR4-213ENST00000483922 COMMD3-BMI1R4GMX3 469 aa10.41□□□□□ -0.74
UBR4-213ENST00000483922 FAM90A8PA6NJQ4 464 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 XRCC2O43543 280 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 ANGPTL7O43827 346 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 RHBDL1O75783 438 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 SEMG1P04279 462 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 GYPBP06028 91 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 CLUP10909 449 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 NDUFB7P17568 137 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 ACKR3P25106 362 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 MSX2P35548 267 aaPredicted RBP10.4□□□□□ -0.74
UBR4-213ENST00000483922 NAA10P41227 235 aaPredicted RBP10.4□□□□□ -0.74
UBR4-213ENST00000483922 GSK3AP49840 483 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 SLC7A2P52569 658 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 CAV3P56539 151 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 BLCAPP62952 87 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 MZT1Q08AG7 82 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 TCTEX1D4Q5JR98 221 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 LINC00471Q8N535 108 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 OR5P3Q8WZ94 311 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 OR5M11Q96RB7 305 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 AMELYQ99218 206 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 COPS4Q9BT78 406 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 CDCA4Q9BXL8 241 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 C19orf12Q9NSK7 152 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 DNAH7Q8WXX0 4024 aa10.4□□□□□ -0.74
UBR4-213ENST00000483922 A0A1W2PQ09 198 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 DHRS12A0PJE2 317 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 A6NDX4 124 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 ZNF593O00488 134 aaPredicted RBP10.39□□□□□ -0.75
UBR4-213ENST00000483922 GSTA4O15217 222 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 TBX1O43435 398 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 IDH3BO43837 385 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 TIPRLO75663 272 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 PSG2P11465 335 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 JUNBP17275 347 aaPredicted RBP10.39□□□□□ -0.75
UBR4-213ENST00000483922 TEX30Q5JUR7 227 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 TMEM200BQ69YZ2 307 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 PGBD2Q6P3X8 592 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 TMEM219Q86XT9 240 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 SLC37A3Q8NCC5 494 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 OR4F17Q8NGA8 305 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 OR8D4Q8NGM9 314 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 OR10Z1Q8NGY1 313 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 HPSE2Q8WWQ2 592 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 FAM162AQ96A26 154 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 MED30Q96HR3 178 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 OR4F4Q96R69 305 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 NMNAT2Q9BZQ4 307 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 NPFFR1Q9GZQ6 430 aa10.39□□□□□ -0.75
UBR4-213ENST00000483922 DCAF13Q9NV06 445 aaKnown RBP10.39□□□□□ -0.75
UBR4-213ENST00000483922 FAM32AQ9Y421 112 aaKnown RBP10.39□□□□□ -0.75
UBR4-213ENST00000483922 OR2AT4A6NND4 320 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 ZNF850A8MQ14 1090 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 H0YAE9 185 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 SPARCP09486 303 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 POU1F1P28069 291 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 CX3CR1P49238 355 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 CD83Q01151 205 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 MAPRE2Q15555 327 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 TMEM95Q3KNT9 176 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 PLA1AQ53H76 456 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 DMRTC1Q5HYR2 192 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 LINC01590Q5TEZ4 76 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 FAM57BQ71RH2 274 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 PAPD5Q8NDF8 572 aaKnown RBP10.38□□□□□ -0.75
UBR4-213ENST00000483922 PROKR2Q8NFJ6 384 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 LYZL4Q96KX0 146 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 OCSTAMPQ9BR26 566 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 OPA3Q9H6K4 179 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 NLKQ9UBE8 527 aa10.38□□□□□ -0.75
UBR4-213ENST00000483922 HUWE1Q7Z6Z7 4374 aaKnown RBP10.37□□□□□ -0.75
UBR4-213ENST00000483922 VGLL3A8MV65 326 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 ZNF878C9JN71 531 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 GADD45GO95257 159 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 ANXA2P07355 339 aaKnown RBP10.37□□□□□ -0.75
UBR4-213ENST00000483922 COX4I1P13073 169 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 CCL3L1P16619 93 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 GABRA2P47869 451 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 ENTPD1P49961 510 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 ZNF121P58317 390 aaPredicted RBP10.37□□□□□ -0.75
UBR4-213ENST00000483922 TSPAN31Q12999 210 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 PRDX4Q13162 271 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 TIGD6Q17RP2 521 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 DEFB121Q5J5C9 76 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 GLYATQ6IB77 296 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 FAM185AQ8N0U4 392 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 CD177Q8N6Q3 437 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 OR5D13Q8NGL4 314 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms