RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 GLRA1P23415 457 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 EPHA8P29322 1005 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 HOXA11P31270 313 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 PBX2P40425 430 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 HIST1H3AP68431 136 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 CDC42EP1Q00587 391 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 IL15RAQ13261 267 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM183BQ1AE95 376 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 WDR25Q64LD2 544 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 LHX8Q68G74 356 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 GLB1LQ6UWU2 654 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 OR52E1Q8NGJ3 308 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM37Q8WXS4 190 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 ERGIC1Q969X5 290 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 CTHRC1Q96CG8 243 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 MEGF9Q9H1U4 602 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 ZMAT3Q9HA38 289 aaKnown RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 IKZF2Q9UKS7 526 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 LAMTOR2Q9Y2Q5 125 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 A0A1B0GU03 582 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 B4DEV8 164 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 ANKRD66B4E2M5 251 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 PRAMEF11O60813 436 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 CHRM2P08172 466 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 STAG3L3P0CL85 134 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 MAKP20794 623 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 ARRB1P49407 418 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 SEC13P55735 322 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 ARHGAP11BQ3KRB8 267 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 KLHDC8AQ8IYD2 350 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 OR2L13Q8N349 312 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 D2HGDHQ8N465 521 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 OR10S1Q8NGN2 331 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 C2orf15Q8WU43 125 aaKnown RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM170AQ8WVE7 144 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 ADAP2Q9NPF8 381 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 MARCH2Q9P0N8 246 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 LIPGQ9Y5X9 500 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 NLRC5Q86WI3 1866 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 BLACEA4D250 179 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 PSG1P11464 419 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 MMP9P14780 707 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 ZNF708P17019 499 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 LGALS7P47929 136 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 COMPP49747 757 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 ARF6P62330 175 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 IL24Q13007 206 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 CNN3Q15417 329 aaKnown RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 CTXN3Q4LDR2 81 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM173Q86WV6 379 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 SAXO1Q8IYX7 474 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM156Q8N614 296 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 POC1AQ8NBT0 407 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 OR2L2Q8NH16 312 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 FAM213BQ8TBF2 198 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 FAM174AQ8TBP5 190 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 IL22RA2Q969J5 263 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 IGSF8Q969P0 613 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 RNF166Q96A37 237 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 ZMYND19Q96E35 227 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 PRRX2Q99811 253 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 SLC12A9Q9BXP2 914 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 SOHLH2Q9NX45 425 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 CRLS1Q9UJA2 301 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 CDV3Q9UKY7 258 aaKnown RBP6.95□□□□□ -1.3
COL4A5-205ENST00000483338 FUT9Q9Y231 359 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 CEP350Q5VT06 3117 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 CLEC18AA5D8T8 446 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 SERPINE3A8MV23 424 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 NUPR1O60356 82 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 WDR1O75083 606 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 DNAJB6O75190 326 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 EN2P19622 333 aaPredicted RBP6.94□□□□□ -1.3
COL4A5-205ENST00000483338 CRYBB1P53674 252 aaPredicted RBP6.94□□□□□ -1.3
COL4A5-205ENST00000483338 SCAND1P57086 179 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 ARF5P84085 180 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 SCGB2A2Q13296 93 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 ICAM4Q14773 271 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 DECR1Q16698 335 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 THSD4Q6ZMP0 1018 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 LINC01555Q8NAE3 123 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 CLEC18CQ8NCF0 446 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 KLHDC9Q8NEP7 349 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 OR2M7Q8NG81 312 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 CPT1CQ8TCG5 803 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 VAMP8Q9BV40 100 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 WFDC1Q9HC57 220 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 RAB18Q9NP72 206 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 ARID1BQ8NFD5 2236 aaPredicted RBP6.94□□□□□ -1.3
COL4A5-205ENST00000483338 A0A1B0GUS0 222 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 F5H5T6 163 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 K7ERU9 68 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 ONECUT2O95948 504 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 PET100P0DJ07 73 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 FAHP16930 419 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 MRPS6P82932 125 aaKnown RBP6.94□□□□□ -1.3
COL4A5-205ENST00000483338 ZFP36L1Q07352 338 aaKnown RBP6.94□□□□□ -1.3
COL4A5-205ENST00000483338 HYAL1Q12794 435 aa6.94□□□□□ -1.3
COL4A5-205ENST00000483338 MPV17LQ2QL34 196 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms