RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 PLPPR2Q96GM1 343 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 NKX3-1Q99801 234 aaPredicted RBP7.05□□□□□ -1.28
USP4-210ENST00000483212 MMP27Q9H306 513 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 METTL17Q9H7H0 456 aaPredicted RBP7.05□□□□□ -1.28
USP4-210ENST00000483212 ZNF442Q9H7R0 627 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 NGBQ9NPG2 151 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 MRPL15Q9P015 296 aaKnown RBP7.05□□□□□ -1.28
USP4-210ENST00000483212 CKLFQ9UBR5 152 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 CGGBP1Q9UFW8 167 aaPredicted RBP7.05□□□□□ -1.28
USP4-210ENST00000483212 KCNN3Q9UGI6 736 aa7.05□□□□□ -1.28
USP4-210ENST00000483212 DIDO1Q9BTC0 2240 aaKnown RBP7.04□□□□□ -1.28
USP4-210ENST00000483212 IGKV1-27A0A075B6S5 117 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 A0A0B4J203 849 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 PQLC2LA1A4F0 135 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 ANXA2P2A6NMY6 339 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 ZNF850A8MQ14 1090 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 TMEM127O75204 238 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 PAHP00439 452 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 PLAUP00749 431 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 NRASP01111 189 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 IGHV3-13P01766 116 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 SELEP16581 610 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 SOX6P35712 828 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 PEX19P40855 299 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 FABP6P51161 128 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 MMP15P51511 669 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 PSMD7P51665 324 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 BMXP51813 675 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 ZP1P60852 638 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 ZNF718Q3SXZ3 478 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 DMRTC1Q5HYR2 192 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 HES5Q5TA89 166 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 DDI2Q5TDH0 399 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 GLT8D1Q68CQ7 371 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 ADAM5Q6NVV9 412 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 BHLHE23Q8NDY6 225 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 OR8G5Q8NG78 346 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 OR4D6Q8NGJ1 314 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 OR6Q1Q8NGQ2 317 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 OR5H6Q8NGV6 325 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 MCFD2Q8NI22 146 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 OR5P3Q8WZ94 311 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 PIGCQ92535 297 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 NEUROG1Q92886 237 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 MRPL24Q96A35 216 aaKnown RBP7.04□□□□□ -1.28
USP4-210ENST00000483212 SPSB1Q96BD6 273 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 ITPKCQ96DU7 683 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 C1orf147Q96MC9 270 aaPredicted RBP7.04□□□□□ -1.28
USP4-210ENST00000483212 TECTBQ96PL2 329 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 SPACA5Q96QH8 159 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 UQCC2Q9BRT2 126 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 PAPOLGQ9BWT3 736 aaKnown RBP7.04□□□□□ -1.28
USP4-210ENST00000483212 MRPL37Q9BZE1 423 aaKnown RBP7.04□□□□□ -1.28
USP4-210ENST00000483212 MIXL1Q9H2W2 232 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 ESRP2Q9H6T0 727 aaKnown RBP7.04□□□□□ -1.28
USP4-210ENST00000483212 CNTD2Q9H8S5 307 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 SMURF1Q9HCE7 757 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 CA10Q9NS85 328 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 MYEF2Q9P2K5 600 aaKnown RBP7.04□□□□□ -1.28
USP4-210ENST00000483212 OR5V1Q9UGF6 321 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 DAPK2Q9UIK4 370 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 FZR1Q9UM11 496 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 SPEF1Q9Y4P9 236 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 MPC1Q9Y5U8 109 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 MYO18BQ8IUG5 2567 aa7.04□□□□□ -1.28
USP4-210ENST00000483212 ANKRD30BLA7E2S9 258 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 E7EQL1 145 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 CTDSP2O14595 271 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 LDLRAD4O15165 306 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 MLNRO43193 412 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 CD3EP07766 207 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 ERCC1P07992 297 aaPredicted RBP7.03□□□□□ -1.28
USP4-210ENST00000483212 INHBBP09529 407 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 CALCBP10092 127 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 NAT2P11245 290 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 PLA2G2AP14555 144 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 SNRPBP14678 240 aaKnown RBP7.03□□□□□ -1.28
USP4-210ENST00000483212 PRKACBP22694 351 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 CA6P23280 308 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 ZNF93P35789 620 aaPredicted RBP7.03□□□□□ -1.28
USP4-210ENST00000483212 KIR2DL3P43628 341 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 OR3A4PP47883 348 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 FUT6P51993 359 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 CLDN12P56749 244 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 RPS23P62266 143 aaKnown RBP7.03□□□□□ -1.28
USP4-210ENST00000483212 QRFPP83859 136 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 PLA2G7Q13093 441 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 RIN1Q13671 783 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 CNN3Q15417 329 aaKnown RBP7.03□□□□□ -1.28
USP4-210ENST00000483212 KISS1Q15726 138 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 ADIPOQQ15848 244 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 CEACAM21Q3KPI0 293 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 IDNKQ5T6J7 187 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 PLCXD3Q63HM9 321 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 VHLLQ6RSH7 139 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 SLC22A25Q6T423 547 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 TREML4Q6UXN2 200 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 LINC00299Q6ZSB3 139 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 MOB3CQ70IA8 216 aa7.03□□□□□ -1.28
USP4-210ENST00000483212 WDR86Q86TI4 376 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms