RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 AAED1Q7RTV5 226 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 C20orf196Q8IYI0 205 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 KCNE4Q8WWG9 221 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 DEFB127Q9H1M4 99 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 PLEK2Q9NYT0 353 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 CDRT15L2A8MXV6 281 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 NMBP08949 121 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 RPA2P15927 270 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 MEOX1P50221 254 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 CLDN18P56856 261 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 GK2Q14410 553 aaPredicted RBP12.65□□□□□ -0.38
CHD3-211ENST00000481999 MEF2DQ14814 521 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 TMEM65Q6PI78 240 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 ZNF584Q8IVC4 421 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 CMBLQ96DG6 245 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 WBP1Q96G27 269 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 LYZL4Q96KX0 146 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 SDHAF2Q9NX18 166 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 RAB22AQ9UL26 194 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 SPEF1Q9Y4P9 236 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 RFPL4AA6NLU0 287 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 RFPL4AL1F8VTS6 287 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 ZNF735P0CB33 412 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 BDKRB2P30411 391 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 GUCA1AP43080 201 aaPredicted RBP12.65□□□□□ -0.38
CHD3-211ENST00000481999 CCL11P51671 97 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 SORDQ00796 357 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 CEACAM16Q2WEN9 425 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 SNAI3Q3KNW1 292 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 ATPAF1Q5TC12 328 aaPredicted RBP12.65□□□□□ -0.38
CHD3-211ENST00000481999 RGS7BPQ6MZT1 257 aaPredicted RBP12.65□□□□□ -0.38
CHD3-211ENST00000481999 JMJD6Q6NYC1 403 aaPredicted RBP12.65□□□□□ -0.38
CHD3-211ENST00000481999 ALKAL2Q6UX46 152 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 ZNF813Q6ZN06 617 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 BPIFB2Q8N4F0 458 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 OR2AE1Q8NHA4 323 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 AKR7LQ8NHP1 331 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 B3GNT4Q9C0J1 378 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 RHBDD3Q9Y3P4 386 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 SESN1Q9Y6P5 492 aa12.65□□□□□ -0.38
CHD3-211ENST00000481999 TMEM235A6NFC5 223 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 MFSD2BA6NFX1 497 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 DISC1C4P0D8 188 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 SCO1O75880 301 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 SP1P08047 785 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 ABLIM2Q6H8Q1 611 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 ZNF774Q6NX45 483 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 TUSC5Q8IXB3 177 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 AQP3Q92482 292 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 MFFQ9GZY8 342 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 KLK13Q9UKR3 277 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 PRR14LQ5THK1 2151 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 BAMBIQ13145 260 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 KCNMB1Q16558 191 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 LPCAT3Q6P1A2 487 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 ACBD4Q8NC06 268 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 MDS2Q8NDY4 140 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 OR5D18Q8NGL1 313 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 OR6K3Q8NGY3 331 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 COQ8AQ8NI60 647 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 FER1L6-AS2Q96M78 137 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 PRRT1Q99946 306 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 ZNF552Q9H707 407 aaPredicted RBP12.64□□□□□ -0.39
CHD3-211ENST00000481999 CALHM2Q9HA72 323 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 APC2O95996 2303 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 ADGRG4Q8IZF6 3080 aa12.64□□□□□ -0.39
CHD3-211ENST00000481999 A0A1W2PP11 408 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 ZP3P21754 424 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 AGTR1P30556 359 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 PPIAP62937 165 aaKnown RBP12.63□□□□□ -0.39
CHD3-211ENST00000481999 ARG2P78540 354 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 FGL1Q08830 312 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 LY6G6FQ5SQ64 297 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 TSPO2Q5TGU0 170 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 SLC22A24Q8N4F4 322 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 STEAP2Q8NFT2 490 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 FDCSPQ8NFU4 85 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 UQCC2Q9BRT2 126 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 SLC2A8Q9NY64 477 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 ABI3Q9P2A4 366 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 PFDN2Q9UHV9 154 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 WIPF3A6NGB9 483 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 RAB27BO00194 218 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 SCGNO76038 276 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 BPNT1O95861 308 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 HPNP05981 417 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 ZMYND11Q15326 602 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 SCGB2B2Q4G0G5 96 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 RNASE10Q5GAN6 216 aaKnown RBP12.63□□□□□ -0.39
CHD3-211ENST00000481999 SLC51BQ86UW2 128 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 SLC38A6Q8IZM9 456 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 OR1M1Q8NGA1 313 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 OR13C8Q8NGS7 320 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 SLC6A7Q99884 636 aa12.63□□□□□ -0.39
CHD3-211ENST00000481999 SF3B5Q9BWJ5 86 aaKnown RBP12.63□□□□□ -0.39
CHD3-211ENST00000481999 A0A096LPE4 126 aa12.62□□□□□ -0.39
CHD3-211ENST00000481999 A0A1W2PPZ6 126 aa12.62□□□□□ -0.39
CHD3-211ENST00000481999 TM4SF5O14894 197 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms