RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 C14orf166Q9Y224 244 aaKnown RBP9.44□□□□□ -0.9
SIK3-210ENST00000480468 HEBP2Q9Y5Z4 205 aa9.44□□□□□ -0.9
SIK3-210ENST00000480468 SCN2AQ99250 2005 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 C1QL1O75973 258 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 SERPINA2P20848 420 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 CTGFP29279 349 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 PTGER4P35408 488 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 COA6Q5JTJ3 125 aaKnown RBP9.43□□□□□ -0.9
SIK3-210ENST00000480468 C1orf140Q5VVS0 124 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 SP5Q6BEB4 398 aaPredicted RBP9.43□□□□□ -0.9
SIK3-210ENST00000480468 ABLIM2Q6H8Q1 611 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 DEGS2Q6QHC5 323 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 LANCL3Q6ZV70 420 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 GPR137CQ8N3F9 429 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 OR52N4Q8NGI2 321 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 OR10G4Q8NGN3 311 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 FAM213BQ8TBF2 198 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 FGGYQ96C11 551 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 SHDQ96IW2 340 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 HIPK2Q9H2X6 1198 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.43□□□□□ -0.9
SIK3-210ENST00000480468 DKKL1Q9UK85 242 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 EMC9Q9Y3B6 208 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 LSM5Q9Y4Y9 91 aaKnown RBP9.43□□□□□ -0.9
SIK3-210ENST00000480468 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 TRBV24-1A0A075B6N3 115 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 DFFBO76075 338 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 IL18BPO95998 194 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 QDPRP09417 244 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 METTL15P1P0C7V9 234 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 AMY2BP19961 511 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 CD200P41217 278 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 OR3A2P47893 321 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 ZNF77Q15935 545 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 PLAC9Q5JTB6 97 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 ZNF506Q5JVG8 444 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
SIK3-210ENST00000480468 ADGRG7Q96K78 797 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 JSRP1Q96MG2 331 aaPredicted RBP9.43□□□□□ -0.9
SIK3-210ENST00000480468 GPR87Q9BY21 358 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 CDH20Q9HBT6 801 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 CAPN10Q9HC96 672 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.43□□□□□ -0.9
SIK3-210ENST00000480468 URGCP-MRPS24S4R325 110 aa9.43□□□□□ -0.9
SIK3-210ENST00000480468 UTRNP46939 3433 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 A0A0A6YYD4 124 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 H0YL77 283 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 M0R143 59 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 TNFSF14O43557 240 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 P2RY2P41231 377 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 PCP4P48539 62 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 MMP16P51512 607 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 RAB38P57729 211 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 RND3P61587 244 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.42□□□□□ -0.9
SIK3-210ENST00000480468 SPSB3Q6PJ21 355 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 ZNF519Q8TB69 540 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 STT3BQ8TCJ2 826 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 SLC22A18Q96BI1 424 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 BSCL2Q96G97 398 aaPredicted RBP9.42□□□□□ -0.9
SIK3-210ENST00000480468 POM121Q96HA1 1249 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 SNHG12Q9BXW3 62 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 SH3BGRL3Q9H299 93 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 LRIT1Q9P2V4 623 aa9.42□□□□□ -0.9
SIK3-210ENST00000480468 LMX1BO60663 402 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 MBPP02686 304 aaPredicted RBP9.41□□□□□ -0.9
SIK3-210ENST00000480468 AMBPP02760 352 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 LINC00614P0C842 121 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 CCR2P41597 374 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 INSM1Q01101 510 aaPredicted RBP9.41□□□□□ -0.9
SIK3-210ENST00000480468 IL13RA2Q14627 380 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 PPA1Q15181 289 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 RAB35Q15286 201 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 FNDC7Q5VTL7 733 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 DGAT2L6Q6ZPD8 337 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 SEMA6DQ8NFY4 1073 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 OR5L2Q8NGL0 311 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 OR4C3Q8NH37 302 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 KCNG3Q8TAE7 436 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 ZNF558Q96NG5 402 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 NICN1Q9BSH3 213 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 PHPT1Q9NRX4 125 aaPredicted RBP9.41□□□□□ -0.9
SIK3-210ENST00000480468 IGLON5A6NGN9 336 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 LATO43561 262 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 SLC16A7O60669 478 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 SCAF4O95104 1147 aaKnown RBP9.41□□□□□ -0.9
SIK3-210ENST00000480468 TK1P04183 234 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 CTSDP07339 412 aaPredicted RBP9.41□□□□□ -0.9
SIK3-210ENST00000480468 NR2C1P13056 603 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 G0S2P27469 103 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 PPM1AP35813 382 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 RPL27P61353 136 aaKnown RBP9.41□□□□□ -0.9
SIK3-210ENST00000480468 HLA-DRB3P79483 266 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 FOXK1P85037 733 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 ZP2Q05996 745 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 PNRC1Q12796 327 aaPredicted RBP9.41□□□□□ -0.9
SIK3-210ENST00000480468 ICAM4Q14773 271 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 HAGHQ16775 308 aa9.41□□□□□ -0.9
SIK3-210ENST00000480468 TMEM182Q6ZP80 229 aaPredicted RBP9.41□□□□□ -0.9
SIK3-210ENST00000480468 COX15Q7KZN9 410 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms