RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 LTB4RQ15722 352 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 LIN52Q52LA3 116 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 TFDP3Q5H9I0 405 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 TNFAIP8L2Q6P589 184 aaPredicted RBP4.73□□□□□ -1.65
RC3H1-204ENST00000479099 P2RY8Q86VZ1 359 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 SLC26A10Q8NG04 563 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 OR2Z1Q8NG97 314 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 OR10A6Q8NH74 314 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 LNX1Q8TBB1 728 aaPredicted RBP4.73□□□□□ -1.65
RC3H1-204ENST00000479099 OR51E1Q8TCB6 317 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 ASB17Q8WXJ9 295 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 YIPF5Q969M3 257 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 C11orf52Q96A22 123 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 TSC22D3Q99576 134 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 TM2D1Q9BX74 207 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 HOXD1Q9GZZ0 328 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 TXNIPQ9H3M7 391 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 WDR41Q9HAD4 459 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 IL1RAPQ9NPH3 570 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 TMEM9BQ9NQ34 198 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 ADARB2Q9NS39 739 aaKnown RBP4.73□□□□□ -1.65
RC3H1-204ENST00000479099 RBM22Q9NW64 420 aaKnown RBP eCLIP4.73□□□□□ -1.65
RC3H1-204ENST00000479099 THYN1Q9P016 225 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 TMEM181Q9P2C4 612 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 TRAPPC4Q9Y296 219 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 NUBP2Q9Y5Y2 271 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 A0A1W2PP64 1363 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 ARHGEF10O15013 1369 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 NID2Q14112 1375 aa4.73□□□□□ -1.65
RC3H1-204ENST00000479099 PPP5D1E7EU14 171 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 E9PLD3 99 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 MFNGO00587 321 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 KPNA4O00629 521 aaPredicted RBP4.72□□□□□ -1.65
RC3H1-204ENST00000479099 TSHBP01222 138 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 EDN1P05305 212 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 MRPL3P09001 348 aaKnown RBP4.72□□□□□ -1.65
RC3H1-204ENST00000479099 SNRPCP09234 159 aaKnown RBP4.72□□□□□ -1.65
RC3H1-204ENST00000479099 CD1DP15813 335 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 SELEP16581 610 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 TAC1P20366 129 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 AK4P27144 223 aaPredicted RBP4.72□□□□□ -1.65
RC3H1-204ENST00000479099 PFN2P35080 140 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 PLA2G5P39877 138 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 SNAP25P60880 206 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 LMO4P61968 165 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 BTN3A2P78410 334 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 BAXQ07812 192 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 Q0VFX4 171 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 HNRNPA0Q13151 305 aaKnown RBP4.72□□□□□ -1.65
RC3H1-204ENST00000479099 TEAD2Q15562 447 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 SYT6Q5T7P8 510 aaPredicted RBP4.72□□□□□ -1.65
RC3H1-204ENST00000479099 OR2T5Q6IEZ7 315 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 Q6ZVH6 145 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 CHMP1BQ7LBR1 199 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 GLT6D1Q7Z4J2 308 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 STX19Q8N4C7 294 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 ZNF561Q8N587 486 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 ZNF491Q8N8L2 437 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 ZNF441Q8N8Z8 693 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 OR52E2Q8NGJ4 325 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 OR51G1Q8NGK1 321 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 OR2T29Q8NH02 315 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 RNASE11Q8TAA1 199 aaKnown RBP4.72□□□□□ -1.65
RC3H1-204ENST00000479099 UCN3Q969E3 161 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 CLDN23Q96B33 292 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 CPNE2Q96FN4 548 aaPredicted RBP4.72□□□□□ -1.65
RC3H1-204ENST00000479099 C9orf85Q96MD7 179 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 TMED9Q9BVK6 235 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 OR11A1Q9GZK7 315 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 ARV1Q9H2C2 271 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 MIXL1Q9H2W2 232 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 OR51I1Q9H343 314 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 LIME1Q9H400 295 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 CLMPQ9H6B4 373 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 RNF167Q9H6Y7 350 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 SH2D2AQ9NP31 389 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 ARMCX1Q9P291 453 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 SPRR3Q9UBC9 169 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 LSM5Q9Y4Y9 91 aaKnown RBP4.72□□□□□ -1.65
RC3H1-204ENST00000479099 SLC22A7Q9Y694 548 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 NCOA1Q15788 1441 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 CCDC171Q6TFL3 1326 aa4.72□□□□□ -1.65
RC3H1-204ENST00000479099 IGHV1OR21-1A0A087WYE8 117 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 IGHV3-20A0A0C4DH32 117 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 A0A0G2JLM5 398 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 ZNF98A6NK75 572 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 ZNF726A6NNF4 738 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 BET1O15155 118 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 FOXH1O75593 365 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 RP2O75695 350 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 IFNA1P01562 189 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 CCR7P32248 378 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 GPR6P46095 362 aaPredicted RBP4.71□□□□□ -1.66
RC3H1-204ENST00000479099 RPS9P46781 194 aaKnown RBP4.71□□□□□ -1.66
RC3H1-204ENST00000479099 OR1D4P47884 311 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 PAX9P55771 341 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 VSX2P58304 361 aaPredicted RBP4.71□□□□□ -1.66
RC3H1-204ENST00000479099 NUTF2P61970 127 aaKnown RBP4.71□□□□□ -1.66
RC3H1-204ENST00000479099 SLC10A7Q0GE19 358 aa4.71□□□□□ -1.66
RC3H1-204ENST00000479099 NRF1Q16656 503 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms