RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 FABP6P51161 128 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 ESRRGP62508 458 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 ADIGQ0VDE8 80 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 MED21Q13503 144 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 RCN1Q15293 331 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 KLHL38Q2WGJ6 581 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 TRMT5Q32P41 509 aaKnown RBP3.34□□□□□ -1.87
CCDC171-207ENST00000478913 Q5VSD8 79 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 LRRC74BQ6ZQY2 392 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 RFLNAQ6ZTI6 216 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 ARCQ7LC44 396 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 MUC15Q8N387 334 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 RNF175Q8N4F7 328 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 KIF2BQ8N4N8 673 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 TMEM252Q8N6L7 170 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 OR51G2Q8NGK0 314 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 UCN3Q969E3 161 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 STARD4Q96DR4 205 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 BTN2A3PQ96KV6 586 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 C4orf36Q96KX1 117 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 SIKE1Q9BRV8 207 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 SRXN1Q9BYN0 137 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 ZNF385DQ9H6B1 395 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 COQ10BQ9H8M1 238 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 TRIM45Q9H8W5 580 aaPredicted RBP3.34□□□□□ -1.87
CCDC171-207ENST00000478913 UVRAGQ9P2Y5 699 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 RABL2AQ9UBK7 228 aaPredicted RBP3.34□□□□□ -1.87
CCDC171-207ENST00000478913 NUP50Q9UKX7 468 aa3.34□□□□□ -1.87
CCDC171-207ENST00000478913 PACSIN2Q9UNF0 486 aaPredicted RBP3.34□□□□□ -1.87
CCDC171-207ENST00000478913 A0A0G2JMP0 313 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 GOLGA8QA0A0J9YX86 632 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 A0A0X1KG70 313 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 IQANK1A0A1B0GTG1 560 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 A0A1B0GWB2 263 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 A0A1W2PNV4 684 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 GOLGA8OA6NCC3 632 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 TRIM49D1C9J1S8 452 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 GOLGA8NF8WBI6 632 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 H0YCG3 227 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 ABCD4O14678 606 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 CASQ2O14958 399 aaPredicted RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 BIRC5O15392 142 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 E2F6O75461 281 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 TNFSF13O75888 250 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 PSMG1O95456 288 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 SOD1P00441 154 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 CA1P00915 261 aaPredicted RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 LHBP01229 141 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 KRT6AP02538 564 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 GABRA4P48169 554 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 HADHBP55084 474 aaKnown RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 CDH4P55283 916 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 BSPH1Q075Z2 132 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 DOC2AQ14183 400 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 TMED2Q15363 201 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 PDK4Q16654 411 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 C1orf146Q5VVC0 180 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 PRSS41Q7RTY9 318 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF571Q7Z3V5 609 aaPredicted RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 TMEM156Q8N614 296 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 ATP6V0D2Q8N8Y2 350 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 OR4M2Q8NGB6 313 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 NEIL3Q8TAT5 605 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 PAQR8Q8TEZ7 354 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 TSEN15Q8WW01 171 aaKnown RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 DCUN1D4Q92564 292 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 DGCR14Q96DF8 476 aaKnown RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 C12orf66Q96MD2 445 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 SERPINI1Q99574 410 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 NRTNQ99748 197 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 RNF126Q9BV68 326 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 DRC3Q9H069 523 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 TRABDQ9H4I3 376 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 VPS37BQ9H9H4 285 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 MRPL47Q9HD33 250 aaKnown RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 B3GNT2Q9NY97 397 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 STOX2Q9P2F5 926 aaPredicted RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 PSMC3IPQ9P2W1 217 aaPredicted RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 STX18Q9P2W9 335 aaKnown RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 GNG12Q9UBI6 72 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 WARS2Q9UGM6 360 aaKnown RBP3.33□□□□□ -1.88
CCDC171-207ENST00000478913 OPN4Q9UHM6 478 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 LGALS13Q9UHV8 139 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 PSMD13Q9UNM6 376 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 TRAF3IP3Q9Y228 551 aa3.33□□□□□ -1.88
CCDC171-207ENST00000478913 MYH11P35749 1972 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 SYNJ2BP-COX16A0A087WUM0 186 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 CXorf51AA0A1B0GTR3 108 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 DPRXA6NFQ7 191 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 E7EQL1 145 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 TXNDC9O14530 226 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF861PO60384 105 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 EDF1O60869 148 aaKnown RBP3.32□□□□□ -1.88
CCDC171-207ENST00000478913 PEX11AO75192 247 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 KLHL2O95198 593 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 LALBAP00709 142 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 SHBGP04278 402 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 HPNP05981 417 aa3.32□□□□□ -1.88
CCDC171-207ENST00000478913 GZMAP12544 262 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms