RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ACSM4P0C7M7 580 aa12.66□□□□□ -0.38
NPHP4-208ENST00000478423 GPM6AP51674 278 aa12.66□□□□□ -0.38
NPHP4-208ENST00000478423 PDCD1Q15116 288 aa12.66□□□□□ -0.38
NPHP4-208ENST00000478423 CLPPQ16740 277 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-208ENST00000478423 TMPRSS7Q7RTY8 843 aa12.66□□□□□ -0.38
NPHP4-208ENST00000478423 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-208ENST00000478423 OR52N4Q8NGI2 321 aa12.66□□□□□ -0.38
NPHP4-208ENST00000478423 CMTM3Q96MX0 182 aa12.66□□□□□ -0.38
NPHP4-208ENST00000478423 HPP00738 406 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 CNR1P21554 472 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 RAB4BP61018 213 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 SSBP1Q04837 148 aaKnown RBP12.65□□□□□ -0.38
NPHP4-208ENST00000478423 C17orf107Q6ZR85 190 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 UQCC2Q9BRT2 126 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 OGG1O15527 345 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 CRYABP02511 175 aaKnown RBP12.65□□□□□ -0.38
NPHP4-208ENST00000478423 CTSBP07858 339 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 PTGFRP43088 359 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 OR2B11Q5JQS5 317 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 OR2T2Q6IF00 324 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 OR13C8Q8NGS7 320 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 MTFP1Q9UDX5 166 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 CACNA1DQ01668 2161 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 SNAPINO95295 136 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 FUT3P21217 361 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 SDHBP21912 280 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 STARD6P59095 220 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 BTN1A1Q13410 526 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 OR8G2PQ6IF36 304 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 ZNF770Q6IQ21 691 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-208ENST00000478423 ARRDC1Q8N5I2 433 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 PXT1Q8NFP0 134 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 ASB10Q8WXI3 467 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 PLK3Q9H4B4 646 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 EDARQ9UNE0 448 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 PPP1R3CQ9UQK1 317 aa12.65□□□□□ -0.38
NPHP4-208ENST00000478423 MED12Q93074 2177 aa12.65□□□□□ -0.39
NPHP4-208ENST00000478423 LRP5LA4QPB2 252 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 ZNF891A8MT65 544 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-208ENST00000478423 IRF3Q14653 427 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 TMEM268Q5VZI3 342 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 SVBPQ8N300 66 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 VWCEQ96DN2 955 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 ARHGAP5-AS1Q96IT6 56 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 FRRS1LQ9P0K9 344 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 hCG_1809904A0A1W2PP81 198 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 A0A1W2PPE2 198 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 A0A1W2PR64 198 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 A0A1W2PRV1 198 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 KRBOX1C9JBD0 128 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 RAB27BO00194 218 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 LTBRP36941 435 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 EIF2S3P41091 472 aaKnown RBP12.64□□□□□ -0.39
NPHP4-208ENST00000478423 HOXA1P49639 335 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-208ENST00000478423 PIGPP57054 158 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 GNG3P63215 75 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 SAV1Q9H4B6 383 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-208ENST00000478423 WDR54Q9H977 334 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 OR4C45A6NMZ5 311 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 AKR7A2O43488 359 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 AKR1C1Q04828 323 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 ACOT7LQ6ZUV0 252 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 TMEM229BQ8NBD8 167 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 SCARB1Q8WTV0 552 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 SCARF2Q96GP6 870 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-208ENST00000478423 UCN2Q96RP3 112 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 PARP12Q9H0J9 701 aaKnown RBP12.64□□□□□ -0.39
NPHP4-208ENST00000478423 TIMM8BQ9Y5J9 83 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-208ENST00000478423 SPAARA0A1B0GVQ0 90 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 CTAG2O75638 210 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 OR2F2O95006 317 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 AADACP22760 399 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 OR2F1Q13607 317 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 PNLIPRP3Q17RR3 467 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 CST9LP1Q5W188 147 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 WDR89Q96FK6 387 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-208ENST00000478423 SLC17A5Q9NRA2 495 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 SLC39A9Q9NUM3 307 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 ZNF391Q9UJN7 358 aa12.64□□□□□ -0.39
NPHP4-208ENST00000478423 TMEM272A0A1B0GTI8 110 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 CCL2P13500 99 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 HLA-DOBP13765 273 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 ZXDAP98168 799 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 BAXQ07812 192 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 GFRALQ6UXV0 394 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 LYG2Q86SG7 212 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 WDSUB1Q8N9V3 476 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 OR10AC1Q8NH08 325 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 PPP1R1CQ8WVI7 109 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 TMED6Q8WW62 240 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 EXTL1Q92935 676 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 RNF32Q9H0A6 362 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 RIMS4Q9H426 269 aaPredicted RBP12.63□□□□□ -0.39
NPHP4-208ENST00000478423 PUS1Q9Y606 427 aaKnown RBP eCLIP12.63□□□□□ -0.39
NPHP4-208ENST00000478423 TRIM64BA6NI03 449 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 SELENOPP49908 381 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 ESCO2Q56NI9 601 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
NPHP4-208ENST00000478423 C20orf196Q8IYI0 205 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms