RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 F5H5T6 163 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 HCRTO43612 131 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 RAD1O60671 282 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 IGKV1D-33P01593 117 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 IGKV1-33P01594 117 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 TRBV12-3P01733 135 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 CRABP2P29373 138 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 GNRHRP30968 328 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 PCK1P35558 622 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 UQCRFS1P47985 274 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 ACLYP53396 1101 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 MFSD14CQ5VZR4 134 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 CNSTQ6PJW8 725 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 CBLN2Q8IUK8 224 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 ITPRIPQ8IWB1 547 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 HS3ST5Q8IZT8 346 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 DTNBP1Q96EV8 351 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 UQCC2Q9BRT2 126 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 SPZ1Q9BXG8 430 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 TBL1XR1Q9BZK7 514 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 RMND5AQ9H871 391 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 AGPAT4Q9NRZ5 378 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 TAS2R3Q9NYW6 316 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 UXTQ9UBK9 157 aaPredicted RBP-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 IKZF2Q9UKS7 526 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 HSPE1-MOB4S4R3N1 261 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 SYNE1Q8NF91 8797 aaKnown RBP-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 TRPM6Q9BX84 2022 aa-0.16□□□□□ -2.43
NCKAP1-204ENST00000477988 TMEM72A0PK05 275 aa-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 BLVRBP30043 206 aaPredicted RBP-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 ELP6Q0PNE2 266 aa-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 PSMD5Q16401 504 aa-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 TRMT10CQ7L0Y3 403 aaKnown RBP-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 BPIFB6Q8NFQ5 453 aa-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 BPIFCQ8NFQ6 507 aa-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 KIFAP3Q92845 792 aa-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 DNAJC30Q96LL9 226 aa-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 ODF2LQ9ULJ1 636 aa-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 FRAS1Q86XX4 4008 aa-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 ELP1O95163 1332 aa-0.16□□□□□ -2.44
NCKAP1-204ENST00000477988 IGKV1D-37A0A075B6S9 117 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 A0A0G2JMP0 313 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 A0A0X1KG70 313 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 SETD1AO15047 1707 aaKnown RBP-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 PSIP1O75475 530 aaKnown RBP-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 ETHE1O95571 254 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 CDK1P06493 297 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 SERPINE2P07093 398 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 PGA5P0DJD9 388 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 NAA10P41227 235 aaPredicted RBP-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 MAGEA12P43365 314 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 HTD2P86397 168 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 MERTKQ12866 999 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 ENDOGQ14249 297 aaKnown RBP-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 CASP8Q14790 479 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 CCDC152Q4G0S7 254 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 TPTE2P1Q5T6R2 138 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 TMEM236Q5W0B7 351 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 CMTM1Q8IZ96 169 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 MFSD8Q8NHS3 518 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 APOBEC3DQ96AK3 386 aaPredicted RBP-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 DYNLL2Q96FJ2 89 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 PPP1R36Q96LQ0 422 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 ALS2CR12Q96Q35 445 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 ROPN1BQ9BZX4 212 aaPredicted RBP-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 OR51M1Q9H341 326 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 RIBC2Q9H4K1 309 aa-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 MRM3Q9HC36 420 aaKnown RBP-0.17□□□□□ -2.44
NCKAP1-204ENST00000477988 IGKV1-9A0A0C4DH69 117 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 A8MWP4 228 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 AIM2O14862 343 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 CLDN11O75508 207 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 PGA4P0DJD7 388 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 PGA3P0DJD8 388 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 CT45A6P0DMU7 189 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 CT45A5P0DMU8 189 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 CT45A7P0DMV0 189 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 HSPA5P11021 654 aaKnown RBP-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 HOXB8P17481 243 aaPredicted RBP-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 SLC6A1P30531 599 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 PLP1P60201 277 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 VPS26BQ4G0F5 336 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 PYCR3Q53H96 274 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 CT45A1Q5HYN5 189 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 C6orf226Q5I0X4 101 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 KDM4DQ6B0I6 523 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 LGALS9CQ6DKI2 356 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 REEP3Q6NUK4 255 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 PMF1Q6P1K2 205 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 AMN1Q8IY45 258 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 MUC15Q8N387 334 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 TCAIMQ8N3R3 496 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 OR8S1Q8NH09 359 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 CT45A3Q8NHU0 189 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 GPR151Q8TDV0 419 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 BTN2A3PQ96KV6 586 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 ZNF251Q9BRH9 671 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 AICDAQ9GZX7 198 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 GABARAPL1Q9H0R8 117 aa-0.18□□□□□ -2.44
NCKAP1-204ENST00000477988 BEX1Q9HBH7 125 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms