RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 EGFEM1PQ0D2K5 195 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 FADDQ13158 208 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 COA6Q5JTJ3 125 aaKnown RBP3.16□□□□□ -1.9
VPS13D-207ENST00000476169 THEM4Q5T1C6 240 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF497Q6ZNH5 498 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 Q6ZTC4 211 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 TMEM179BQ7Z7N9 219 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 MRPL52Q86TS9 123 aaKnown RBP3.16□□□□□ -1.9
VPS13D-207ENST00000476169 TMEM25Q86YD3 366 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 PGAM4Q8N0Y7 254 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 GPR26Q8NDV2 337 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 LFNGQ8NES3 379 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 OR5T1Q8NG75 326 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 OR10W1Q8NGF6 305 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 OR10Z1Q8NGY1 313 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 OR10J6PQ8NGY7 276 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 RXFP2Q8WXD0 754 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 DNAJC19Q96DA6 116 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 CMTM5Q96DZ9 223 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 VSIG2Q96IQ7 327 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF488Q96MN9 340 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 Q96MT0 163 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 RNF145Q96MT1 663 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 C20orf144Q9BQM9 153 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 COA1Q9GZY4 146 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 ARV1Q9H2C2 271 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 RDH14Q9HBH5 336 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 TREX1Q9NSU2 369 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 MTFP1Q9UDX5 166 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 FBXL3Q9UKT7 428 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 ACOT9Q9Y305 439 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 HEBP2Q9Y5Z4 205 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 POLR3AO14802 1390 aaPredicted RBP3.15□□□□□ -1.9
VPS13D-207ENST00000476169 CEMIPQ8WUJ3 1361 aa3.15□□□□□ -1.9
VPS13D-207ENST00000476169 GON4LQ3T8J9 2241 aa3.15□□□□□ -1.9
VPS13D-207ENST00000476169 IGLV1-36A0A0B4J1U3 117 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 A0A0J9YXY3 114 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 KIR2DS1A0A191URI9 304 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 SLC5A10A0PJK1 596 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 GJE1A6NN92 205 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 FABP7O15540 132 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 ATP8B1O43520 1251 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 MPZL2O60487 215 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 SHOX2O60902 331 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 UPK1BO75841 260 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 KLF8O95600 359 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 RAB36O95755 333 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 SLC35G6P0C7Q6 338 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 RPA3P35244 121 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 CEACAM6P40199 344 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 RPL14P50914 215 aaKnown RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 NCBP2P52298 156 aaKnown RBP eCLIP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 DIO3P55073 304 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 TAS2R46P59540 309 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 BNIP2Q12982 314 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 STX5Q13190 355 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 MED21Q13503 144 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 CAPRIN1Q14444 709 aaKnown RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 KIR2DS1Q14954 304 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 RGS21Q2M5E4 152 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 TMEM249Q2WGJ8 235 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 RFX4Q33E94 735 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 C14orf177Q52M58 125 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 COQ5Q5HYK3 327 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 SAPCD1Q5SSQ6 148 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 MARC1Q5VT66 337 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 METTL7BQ6UX53 244 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 TEX43Q6ZNM6 134 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 Q6ZT83 130 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 C10orf107Q8IVU9 208 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 DAW1Q8N136 415 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 TMEM251Q8N6I4 163 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 METTL13Q8N6R0 699 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 CCDC112Q8NEF3 446 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 OR2L5Q8NG80 312 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 OR10AD1Q8NGE0 317 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 DCUN1D4Q92564 292 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF689Q96CS4 500 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 ZMYND19Q96E35 227 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 BTN2A3PQ96KV6 586 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF599Q96NL3 588 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 SIGLEC12Q96PQ1 595 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 VGLL1Q99990 258 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 RSG1Q9BU20 258 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 PARD6GQ9BYG4 376 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 SLIRPQ9GZT3 109 aaKnown RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 NXF2Q9GZY0 626 aaKnown RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 EXOSC4Q9NPD3 245 aaKnown RBP3.15□□□□□ -1.91
VPS13D-207ENST00000476169 CCL28Q9NRJ3 127 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 UVRAGQ9P2Y5 699 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 DCCP43146 1447 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 RAD50Q92878 1312 aa3.15□□□□□ -1.91
VPS13D-207ENST00000476169 IQGAP1P46940 1657 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 TRAV8-4A0A0B4J246 113 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 IGHV2OR16-5A0A0B4J2B6 119 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 GOLGA6L19H0YKK7 550 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 SLC31A2O15432 143 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 CTNSO60931 367 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 SERF1AO75920 110 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 GLSO94925 669 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms