RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 PCMT1P22061 227 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 CFL1P23528 166 aaKnown RBP5.9□□□□□ -1.46
LIMD1-204ENST00000474665 THBS2P35442 1172 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 LIPAP38571 399 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 DDOSTP39656 456 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 WNT4P56705 351 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 EMX1Q04741 257 aaPredicted RBP5.9□□□□□ -1.46
LIMD1-204ENST00000474665 ACSM1Q08AH1 577 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 MED21Q13503 144 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 MPPED2Q15777 294 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 CCDC58Q4VC31 144 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 FAM209AQ5JX71 171 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 RPL22L1Q6P5R6 122 aaKnown RBP5.9□□□□□ -1.46
LIMD1-204ENST00000474665 CRIP3Q6Q6R5 217 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 TMPRSS11AQ6ZMR5 421 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 RNF144BQ7Z419 303 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 FAM220AQ7Z4H9 259 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 SPARTQ8N0X7 666 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 OR13C5Q8NGS8 318 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 ITLN1Q8WWA0 313 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 ELMOD3Q96FG2 381 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 MEGF10Q96KG7 1140 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 OR2V2Q96R30 315 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 YTHDF1Q9BYJ9 559 aaKnown RBP5.9□□□□□ -1.46
LIMD1-204ENST00000474665 RAB1BQ9H0U4 201 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 Q9H521 79 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 OPA3Q9H6K4 179 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 CYSLTR2Q9NS75 346 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 TMEM100Q9NV29 134 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 CGGBP1Q9UFW8 167 aaPredicted RBP5.9□□□□□ -1.46
LIMD1-204ENST00000474665 GPR160Q9UJ42 338 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF391Q9UJN7 358 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 PIGLQ9Y2B2 252 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 IGKV1-27A0A075B6S5 117 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 IGHV4-30-2A0A087WSY4 118 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 IGKV1-9A0A0C4DH69 117 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 TRBV2A0A0J9YWF9 115 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 TRBV5-5A0A0J9YX44 114 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF816-ZNF321PA0A0X1KG74 233 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 PLSCR5A0PG75 271 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 DHRS7CA6NNS2 312 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF850A8MQ14 1090 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 VWC2LB2RUY7 222 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 WNT9BO14905 357 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 SYT7O43581 403 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 PLPP2O43688 288 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 SSX4O60224 188 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 GMDSO60547 372 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 CDC14BO60729 498 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 BMP4P12644 408 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 DAOP14920 347 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 ATP6V1B1P15313 513 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 EGR1P18146 543 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 ACHEP22303 614 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 GIFP27352 417 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 CD200P41217 278 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 GATA4P43694 442 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 MAP2K3P46734 347 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 GBX2P52951 348 aaPredicted RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 GABARAPL2P60520 117 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 MRPS11P82912 194 aaKnown RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 TNFAIP6P98066 277 aaPredicted RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 PRDX4Q13162 271 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 RIN1Q13671 783 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 INSL4Q14641 139 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 SPHARQ15513 63 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 TBCEQ15813 527 aaPredicted RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 UBE2V2Q15819 145 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 MOGQ16653 247 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 PCGF3Q3KNV8 242 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 KCTD21Q4G0X4 260 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 FAM76BQ5HYJ3 339 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 TMEM244Q5VVB8 128 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 PRAMEF6Q5VXH4 476 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 PRSS57Q6UWY2 283 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 DOK3Q7L591 496 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 MAPK1IP1LQ8NDC0 245 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 CSNK2A3Q8NEV1 391 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 SEMA6DQ8NFY4 1073 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 C10orf105Q8TEF2 133 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 NEU4Q8WWR8 484 aaPredicted RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 OR5P3Q8WZ94 311 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 GHSRQ92847 366 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 ORAI1Q96D31 301 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 SMIM19Q96E16 107 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 TRMT61AQ96FX7 289 aaKnown RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 MRPL48Q96GC5 212 aaKnown RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 OPALINQ96PE5 141 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 PAPOLGQ9BWT3 736 aaKnown RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 PPIL3Q9H2H8 161 aaKnown RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 GCM1Q9NP62 436 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 ACOT13Q9NPJ3 140 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 YAE1D1Q9NRH1 226 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF275Q9NSD4 429 aaPredicted RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 TREM2Q9NZC2 230 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 FBXO9Q9UK97 447 aaPredicted RBP5.89□□□□□ -1.47
LIMD1-204ENST00000474665 ZDHHC8Q9ULC8 765 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 ERGIC3Q9Y282 383 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 LRCH1Q9Y2L9 728 aa5.89□□□□□ -1.47
LIMD1-204ENST00000474665 RYR3Q15413 4870 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms