RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 P2RY10O00398 339 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 TMPRSS2O15393 492 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 HOXA3O43365 443 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-209ENST00000474432 PRKYO43930 277 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 MITFO75030 526 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-209ENST00000474432 TOX4O94842 621 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 IGLV3-1P01715 115 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 EPHA2P29317 976 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 GNALP38405 381 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 TGM4P49221 684 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 BPIFB3P59826 476 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 RPS7P62081 194 aaKnown RBP15.33■□□□□ 0.04
COL7A1-209ENST00000474432 IL5RAQ01344 420 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 SNAPC1Q16533 368 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 C11orf91Q3C1V1 193 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 GPR157Q5UAW9 335 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 STUMQ69YW2 141 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 BCDIN3DQ7Z5W3 292 aaKnown RBP15.33■□□□□ 0.04
COL7A1-209ENST00000474432 FAM216BQ8N7L0 139 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 LY6G5BQ8NDX9 201 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 DNAJC9Q8WXX5 260 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 RPL3LQ92901 407 aaKnown RBP15.33■□□□□ 0.04
COL7A1-209ENST00000474432 PPP1R14AQ96A00 147 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 SLC25A28Q96A46 364 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 PKP2Q99959 881 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 MICU1Q9BPX6 476 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 NIPAL2Q9H841 368 aa15.33■□□□□ 0.04
COL7A1-209ENST00000474432 RPUSD1Q9UJJ7 312 aaKnown RBP15.33■□□□□ 0.04
COL7A1-209ENST00000474432 M0R129 80 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 TFF1P04155 84 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 MRPL3P09001 348 aaKnown RBP15.32■□□□□ 0.04
COL7A1-209ENST00000474432 ARF6P62330 175 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 ROM1Q03395 351 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 MICBQ29980 383 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 ATPAF1Q5TC12 328 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-209ENST00000474432 DEGS2Q6QHC5 323 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 Q6YL49 198 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 KRT77Q7Z794 578 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 PNLDC1Q8NA58 520 aaKnown RBP15.32■□□□□ 0.04
COL7A1-209ENST00000474432 SCCPDHQ8NBX0 429 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 OR10Z1Q8NGY1 313 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 OR5K1Q8NHB7 308 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 PIGCQ92535 297 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 LAMP5Q9UJQ1 280 aa15.32■□□□□ 0.04
COL7A1-209ENST00000474432 A0A0U1RQV5 110 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 ANXA2P2A6NMY6 339 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 SRSF10O75494 262 aaKnown RBP15.31■□□□□ 0.04
COL7A1-209ENST00000474432 ECDO95905 644 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-209ENST00000474432 SELLP14151 372 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 SNCBQ16143 134 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 AADACL4Q5VUY2 407 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 C16orf87Q6PH81 154 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 OR5T2Q8NGG2 359 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 SGMS2Q8NHU3 365 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 ST8SIA4Q92187 359 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 C12orf43Q96C57 262 aaKnown RBP15.31■□□□□ 0.04
COL7A1-209ENST00000474432 RAB3IPQ96QF0 476 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-209ENST00000474432 OR8B4Q96RC9 309 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 RTL8AQ9BWD3 113 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 HAO2Q9NYQ3 351 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 ZNF391Q9UJN7 358 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 TRRAPQ9Y4A5 3859 aa15.31■□□□□ 0.04
COL7A1-209ENST00000474432 IGHV1-69DA0A0B4J2H0 117 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 ACOD1A6NK06 481 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 TMEM210A6NLX4 147 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 IGHV1-69P01742 117 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 MELTFP08582 738 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 ESRRGP62508 458 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 ATP6AP1Q15904 470 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 SLX4IPQ5VYV7 408 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 FTMTQ8N4E7 242 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 RNF170Q96K19 258 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 TTTY10Q9BZA0 68 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 CNTD2Q9H8S5 307 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 NOX4Q9NPH5 578 aa15.3■□□□□ 0.04
COL7A1-209ENST00000474432 TMEM269A0A1B0GVZ9 245 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 ZAR1LA6NP61 321 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 MAGEB4O15481 346 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-209ENST00000474432 AKR7A2O43488 359 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 RHBDL1O75783 438 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 GMFBP60983 142 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 MFGE8Q08431 387 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-209ENST00000474432 PDCD1Q15116 288 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 DMRTC1Q5HYR2 192 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 METTL11BQ5VVY1 283 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 C12orf73Q69YU5 71 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 KDM4DQ6B0I6 523 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 KCTD18Q6PI47 426 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-209ENST00000474432 ZNF788Q6ZQV5 615 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 MEPCEQ7L2J0 689 aaKnown RBP15.29■□□□□ 0.04
COL7A1-209ENST00000474432 ZDHHC23Q8IYP9 409 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 ZNF679Q8IYX0 411 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 PIP4P2Q8N4L2 257 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 ANGPTL6Q8NI99 470 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 LHX4Q969G2 390 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 DUS3LQ96G46 650 aaKnown RBP15.29■□□□□ 0.04
COL7A1-209ENST00000474432 GAFA1Q96PS6 74 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 PBOV1Q9GZY1 135 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 OR51I2Q9H344 312 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 UNKLQ9H9P5 680 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms