RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CTSZQ9UBR2 303 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 ZNF69Q9UC07 566 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 WARS2Q9UGM6 360 aaKnown RBP9.31□□□□□ -0.92
CKS1B-206ENST00000474215 IGHV3OR15-7A0A075B7D8 119 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 TMEM210A6NLX4 147 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 ZNF670-ZNF695F2Z2N8 137 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 TRIM77I1YAP6 450 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 MAGEB4O15481 346 aaPredicted RBP9.3□□□□□ -0.92
CKS1B-206ENST00000474215 GYPAP02724 150 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 ATP6V1B1P15313 513 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 EGR1P18146 543 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 POU4F2Q12837 409 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 KPNB1Q14974 876 aaKnown RBP9.3□□□□□ -0.92
CKS1B-206ENST00000474215 MICBQ29980 383 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 TUSC1Q2TAM9 212 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 ZNF829Q3KNS6 432 aaPredicted RBP9.3□□□□□ -0.92
CKS1B-206ENST00000474215 FAM76BQ5HYJ3 339 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 RBMS3Q6XE24 437 aaKnown RBP9.3□□□□□ -0.92
CKS1B-206ENST00000474215 C10orf67Q8IYJ2 551 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.3□□□□□ -0.92
CKS1B-206ENST00000474215 OR8J1Q8NGP2 316 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 OR51E1Q8TCB6 317 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 FAM216AQ8WUB2 273 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 PPP1R14AQ96A00 147 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 UPRTQ96BW1 309 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 TECTBQ96PL2 329 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 TTTY10Q9BZA0 68 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 RASSF4Q9H2L5 321 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 RIBC2Q9H4K1 309 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 KAAG1Q9UBP8 84 aa9.3□□□□□ -0.92
CKS1B-206ENST00000474215 NUFIP1Q9UHK0 495 aaKnown RBP9.3□□□□□ -0.92
CKS1B-206ENST00000474215 ZNF816-ZNF321PA0A0X1KG74 233 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 C22orf46C9J442 243 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 H3BNX3 289 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.29□□□□□ -0.92
CKS1B-206ENST00000474215 DVL1O14640 695 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 ENSAO43768 121 aaKnown RBP9.29□□□□□ -0.92
CKS1B-206ENST00000474215 SRSF10O75494 262 aaKnown RBP9.29□□□□□ -0.92
CKS1B-206ENST00000474215 IGLV3-1P01715 115 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 LIPFP07098 398 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 HTR1FP30939 366 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 EGR3Q06889 387 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 MFGE8Q08431 387 aaPredicted RBP9.29□□□□□ -0.92
CKS1B-206ENST00000474215 RIPPLY1Q0D2K3 151 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 C11orf91Q3C1V1 193 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 CEACAM21Q3KPI0 293 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 ZFP1Q6P2D0 407 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 KCTD8Q6ZWB6 473 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 COMMD2Q86X83 199 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 ZDHHC23Q8IYP9 409 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 SCCPDHQ8NBX0 429 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 OR51G2Q8NGK0 314 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 OR10Z1Q8NGY1 313 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 RPL3LQ92901 407 aaKnown RBP9.29□□□□□ -0.92
CKS1B-206ENST00000474215 FAM71F1Q96KD3 344 aaPredicted RBP9.29□□□□□ -0.92
CKS1B-206ENST00000474215 SMURF1Q9HCE7 757 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 GPR84Q9NQS5 396 aa9.29□□□□□ -0.92
CKS1B-206ENST00000474215 MRM2Q9UI43 246 aaKnown RBP9.29□□□□□ -0.92
CKS1B-206ENST00000474215 FBN3Q75N90 2809 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 WNK2Q9Y3S1 2297 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 SRRM5B3KS81 715 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 LOC110117498-PIK3R3F6TDL0 507 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 EBAG9O00559 213 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 TMPRSS2O15393 492 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 MTRF1O75570 445 aaKnown RBP9.28□□□□□ -0.92
CKS1B-206ENST00000474215 ECDO95905 644 aaPredicted RBP9.28□□□□□ -0.92
CKS1B-206ENST00000474215 PLATP00750 562 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 TTRP02766 147 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 ALPLP05186 524 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 OR2T7P0C7T2 308 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 IGHV4-38-2P0DP08 117 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 ATP6V1E1P36543 226 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 GPM6AP51674 278 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 CDC42P60953 191 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 FGF12P61328 243 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 GNG3P63215 75 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 TMED1Q13445 227 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 BCL2L15Q5TBC7 163 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 ZBTB37Q5TC79 503 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 C9orf139Q6ZV77 190 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 DOK3Q7L591 496 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 THAP5Q7Z6K1 395 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 ELMOD2Q8IZ81 293 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 BCL6BQ8N143 479 aaPredicted RBP9.28□□□□□ -0.92
CKS1B-206ENST00000474215 SIGLECL1Q8N7X8 197 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 ZDHHC22Q8N966 263 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 PNLDC1Q8NA58 520 aaKnown RBP9.28□□□□□ -0.92
CKS1B-206ENST00000474215 OR5A2Q8NGI9 324 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 OR2T27Q8NH04 317 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 TRUB1Q8WWH5 349 aaKnown RBP9.28□□□□□ -0.92
CKS1B-206ENST00000474215 HPSE2Q8WWQ2 592 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 RFKQ969G6 155 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 UBE2FQ969M7 185 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 EME1Q96AY2 570 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 C12orf43Q96C57 262 aaKnown RBP9.28□□□□□ -0.92
CKS1B-206ENST00000474215 SEH1LQ96EE3 360 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 CCL13Q99616 98 aa9.28□□□□□ -0.92
CKS1B-206ENST00000474215 FGF23Q9GZV9 251 aaPredicted RBP9.28□□□□□ -0.92
CKS1B-206ENST00000474215 MS4A7Q9GZW8 240 aaPredicted RBP9.28□□□□□ -0.92
CKS1B-206ENST00000474215 OR51I2Q9H344 312 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms