RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SYS1Q8N2H4 156 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 OR1M1Q8NGA1 313 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 OR51F2Q8NH61 342 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 HAVCR2Q8TDQ0 301 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 OR5P3Q8WZ94 311 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 FGF20Q9NP95 211 aaPredicted RBP11.58□□□□□ -0.56
USF1-205ENST00000473969 TRIM36Q9NQ86 728 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 ERVK13-1Q9NX77 482 aa11.58□□□□□ -0.56
USF1-205ENST00000473969 EXOSC1Q9Y3B2 195 aaKnown RBP11.58□□□□□ -0.56
USF1-205ENST00000473969 CHD3Q12873 2000 aaKnown RBP11.57□□□□□ -0.56
USF1-205ENST00000473969 EFCAB10A6NFE3 127 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 DHRS7CA6NNS2 312 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 INAFM1C9JVW0 142 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 ZNF205O95201 554 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 PTBP3O95758 552 aaKnown RBP11.57□□□□□ -0.56
USF1-205ENST00000473969 SERPINA3P01011 423 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 NRASP01111 189 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 IGLV3-1P01715 115 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 IGHV2-5P01817 119 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 RPSAP08865 295 aaKnown RBP11.57□□□□□ -0.56
USF1-205ENST00000473969 FAHP16930 419 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 HNF1AP20823 631 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 HSPA13P48723 471 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 AQP4P55087 323 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 LMO4P61968 165 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 RIPK1Q13546 671 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 ZMYND11Q15326 602 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 CEACAM21Q3KPI0 293 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 WDR38Q5JTN6 314 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 CEP78Q5JTW2 689 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 CLVS2Q5SYC1 327 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 GLCCI1Q86VQ1 547 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 OR2G2Q8NGZ5 317 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 TFAP2CQ92754 450 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 ITPKCQ96DU7 683 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 TMEM80Q96HE8 168 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 LPAR2Q9HBW0 351 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 V9GYS6 101 aa11.57□□□□□ -0.56
USF1-205ENST00000473969 ZNF469Q96JG9 3925 aaPredicted RBP11.56□□□□□ -0.56
USF1-205ENST00000473969 TRAV38-1A0A0B4J264 116 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 A0A1B0GTI1 187 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 OR5B21A6NL26 309 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 ZNF732B4DXR9 585 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 ATP6V1G2O95670 118 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 MSMBP08118 114 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 GNAO1P09471 354 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 CCDC159P0C7I6 412 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 CPT2P23786 658 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 PMELP40967 661 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 GPM6AP51674 278 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 CCR9P51686 369 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 GNG3P63215 75 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 CSNK2BP67870 215 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 ZNF154Q13106 437 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 ALKBH1Q13686 389 aaKnown RBP11.56□□□□□ -0.56
USF1-205ENST00000473969 FDX2Q6P4F2 183 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 PRSS35Q8N3Z0 413 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 STX19Q8N4C7 294 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 ZNF676Q8N7Q3 588 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 DEFB108BQ8NET1 73 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 BPIFB6Q8NFQ5 453 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 OR5A2Q8NGI9 324 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 OR14K1Q8NGZ2 314 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 NRG4Q8WWG1 115 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 C1orf159Q96HA4 380 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 COMMD4Q9H0A8 199 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 PATZ1Q9HBE1 687 aaKnown RBP11.56□□□□□ -0.56
USF1-205ENST00000473969 MIOXQ9UGB7 285 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 SLC7A11Q9UPY5 501 aa11.56□□□□□ -0.56
USF1-205ENST00000473969 CAB39Q9Y376 341 aaPredicted RBP11.56□□□□□ -0.56
USF1-205ENST00000473969 CR1P17927 2039 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 DYSFO75923 2080 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 HIVEP2P31629 2446 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 LOC107986453A0A1B0GWG9 222 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 FAM157AC9JC47 383 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 H3BSH0 61 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 LGALS8O00214 317 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 CDIPTO14735 213 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 FOXH1O75593 365 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 GATBO75879 557 aaKnown RBP11.55□□□□□ -0.56
USF1-205ENST00000473969 FSTL3O95633 263 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 OCM2P0CE71 109 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 OCMP0CE72 109 aaPredicted RBP11.55□□□□□ -0.56
USF1-205ENST00000473969 RPS2P15880 293 aaKnown RBP11.55□□□□□ -0.56
USF1-205ENST00000473969 ZNF20P17024 532 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 CCL1P22362 96 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 DVL1P1P54792 670 aaPredicted RBP11.55□□□□□ -0.56
USF1-205ENST00000473969 HNRNPA0Q13151 305 aaKnown RBP11.55□□□□□ -0.56
USF1-205ENST00000473969 ESCO2Q56NI9 601 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 FAM201AQ5SY85 155 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 ZNF826PQ6ZT77 177 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 NLRC3Q7RTR2 1065 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 OR8B3Q8NGG8 313 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 ZNF671Q8TAW3 534 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 LRRC29Q8WV35 223 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 TMEM186Q96B77 213 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 C10orf35Q96D05 121 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 PELI1Q96FA3 418 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 TECTBQ96PL2 329 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 OR8B2Q96RD0 313 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms