RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SEC14L4Q9UDX3 406 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SEC14L3Q9UDX4 400 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 RSL24D1Q9UHA3 163 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 IL20RAQ9UHF4 553 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CLEC2DQ9UHP7 191 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PSORS1C1Q9UIG5 152 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PHF11Q9UIL8 331 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GMEB2Q9UKD1 530 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ELF5Q9UKW6 265 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF346Q9UL40 294 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SNX7Q9UNH6 387 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SATB2Q9UPW6 733 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ERVK-19Q9WJR5 959 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 LIPT1Q9Y234 373 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 POFUT2Q9Y2G5 429 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PLEKHA6Q9Y2H5 1048 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SH3GLB1Q9Y371 365 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 WDR45Q9Y484 360 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GMPPBQ9Y5P6 360 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CDH10Q9Y6N8 788 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 COLEC10Q9Y6Z7 277 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 COMMD3-BMI1R4GMX3 469 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 HSPE1-MOB4S4R3N1 261 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 JMJD1CQ15652 2540 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ACANP16112 2415 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 UNC79Q9P2D8 2635 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 HECTD1Q9ULT8 2610 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TRAV27A0A087WT01 109 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TRAV24A0A0B4J272 114 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 IGHV3-20A0A0C4DH32 117 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 A0A0G2JMM0 328 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 IGHV5-10-1A0A0J9YXX1 117 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1B0GTQ1 180 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PNMA8CA0A1B0GUJ8 204 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 IQCMA0A1B0GVH7 501 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1B0GWA3 101 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1W2PPB8 328 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1W2PRS3 328 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SMIM30A4D0T7 59 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 FAM183AA6NL82 134 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 A8MU76 341 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 A8MUA0 341 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 KIR3DP1A8MWS1 328 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF99A8MXY4 864 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 C17orf105B2RV13 164 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM150CB9EJG8 249 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 D6RAR5 112 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 H0YIG0 161 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 H3BN98 237 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 J3QRK9 145 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF701M0R085 212 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 WWP2O00308 870 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 BHLHE40O14503 412 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CHP2O43745 196 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 DUX1O43812 170 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 GMFGO60234 142 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SELENOFO60613 162 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TSPAN2O60636 221 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CTNSO60931 367 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ICOSLGO75144 302 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 UGT2B11O75310 529 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 GPX5O75715 221 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OR5F1O95221 314 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OXSR1O95747 527 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 GPR75O95800 540 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 AK1P00568 194 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RPLP0P05388 317 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 GYPBP06028 91 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 DBIP07108 87 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 MRPL3P09001 348 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TSPAN19P0C672 248 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ANKRD34CP0C6C1 535 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SLC35E2P0CK97 266 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 LIMS3P0CW19 117 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 LIMS4P0CW20 117 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 IFI30P13284 250 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RNH1P13489 461 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ANXA8P13928 327 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CTSEP14091 401 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SPNP16150 400 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SELEP16581 610 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CD36P16671 472 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TNNI3P19429 210 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CCNA2P20248 432 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SLC2A5P22732 501 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 GADD45AP24522 165 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 EEF1B2P24534 225 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PSMB9P28065 219 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CD1CP29017 333 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CD40LGP29965 261 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 MPIP34949 423 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RORAP35398 523 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PTGDSP41222 190 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ACAA2P42765 397 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 MAGEA8P43361 318 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CXCL12P48061 93 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RFX3P48380 749 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SERPINB10P48595 397 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 DHPSP49366 369 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ETV1P50549 477 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms