RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SFRP4Q6FHJ7 346 aaPredicted RBP15.83■□□□□ 0.12
PTCD3-210ENST00000473829 C1orf229Q6ZS94 237 aaPredicted RBP15.83■□□□□ 0.12
PTCD3-210ENST00000473829 CATSPERDQ86XM0 798 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 ZDHHC23Q8IYP9 409 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 SEMA6DQ8NFY4 1073 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 MICU1Q9BPX6 476 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 RTL8AQ9BWD3 113 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 TMPRSS13Q9BYE2 586 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 TLNRD1Q9H1K6 362 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 AMBNQ9NP70 447 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 GNG8Q9UK08 70 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 EXOGQ9Y2C4 368 aaKnown RBP15.83■□□□□ 0.12
PTCD3-210ENST00000473829 hCG_1807616A0A1W2PRN6 198 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 A8MXK9 166 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 FOXH1O75593 365 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 DHRS3O75911 302 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 LHBP01229 141 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 PCMT1P22061 227 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 PSMB10P40306 273 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 ACTC1P68032 377 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 ACTA1P68133 377 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 ODF4Q2M2E3 257 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 CEP78Q5JTW2 689 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 FAHD2BQ6P2I3 314 aaPredicted RBP15.82■□□□□ 0.12
PTCD3-210ENST00000473829 WDR82Q6UXN9 313 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 PRSS35Q8N3Z0 413 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 FAHD2AQ96GK7 314 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 MMP26Q9NRE1 261 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 PIGLQ9Y2B2 252 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 V9GYS6 101 aa15.82■□□□□ 0.12
PTCD3-210ENST00000473829 TRAPPC2LH3BP13 241 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 H3BSH0 61 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.81■□□□□ 0.12
PTCD3-210ENST00000473829 LGALS8O00214 317 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 MPZL2O60487 215 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 WBP4O75554 376 aaKnown RBP15.81■□□□□ 0.12
PTCD3-210ENST00000473829 ATP6V1B1P15313 513 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 KIR3DL2P43630 455 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 RIPPLY1Q0D2K3 151 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 SMN1Q16637 294 aaKnown RBP15.81■□□□□ 0.12
PTCD3-210ENST00000473829 CDONQ4KMG0 1287 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 WDR38Q5JTN6 314 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 OGFRL1Q5TC84 451 aaPredicted RBP15.81■□□□□ 0.12
PTCD3-210ENST00000473829 DCAF12L2Q5VW00 463 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 DCDC5Q6ZRR9 648 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 Q6ZSR3 168 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 PACRGLQ8N7B6 248 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 ZNF555Q8NEP9 628 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 OR14K1Q8NGZ2 314 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 LRRC29Q8WV35 223 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 RPL3LQ92901 407 aaKnown RBP15.81■□□□□ 0.12
PTCD3-210ENST00000473829 RNF170Q96K19 258 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 ABCB9Q9NP78 766 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 CTSZQ9UBR2 303 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 MYRFQ9Y2G1 1151 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 LRCH1Q9Y2L9 728 aa15.81■□□□□ 0.12
PTCD3-210ENST00000473829 POLR3KQ9Y2Y1 108 aaPredicted RBP15.81■□□□□ 0.12
PTCD3-210ENST00000473829 IGHV3OR15-7A0A075B7D8 119 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 A0A0G2JMP0 313 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 A0A0X1KG70 313 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 DAPL1A0PJW8 107 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 OOEPA6NGQ2 149 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 ERICH4A6NGS2 130 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 CDIPTO14735 213 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 CASQ2O14958 399 aaPredicted RBP15.8■□□□□ 0.12
PTCD3-210ENST00000473829 CCL1P22362 96 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 GPM6AP51674 278 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 OR12D2P58182 307 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 ELF3P78545 371 aaPredicted RBP15.8■□□□□ 0.12
PTCD3-210ENST00000473829 ESCO2Q56NI9 601 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 ZBTB37Q5TC79 503 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 ZNF691Q5VV52 312 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 FAM220AQ7Z4H9 259 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 THAP5Q7Z6K1 395 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 FAM90A1Q86YD7 464 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 OR4M2Q8NGB6 313 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 SEH1LQ96EE3 360 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 NEIL1Q96FI4 390 aaPredicted RBP15.8■□□□□ 0.12
PTCD3-210ENST00000473829 SSBP3Q9BWW4 388 aaPredicted RBP15.8■□□□□ 0.12
PTCD3-210ENST00000473829 RNPEPL1Q9HAU8 725 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 NKX1-2Q9UD57 310 aaPredicted RBP15.8■□□□□ 0.12
PTCD3-210ENST00000473829 MIOXQ9UGB7 285 aa15.8■□□□□ 0.12
PTCD3-210ENST00000473829 FBN1P35555 2871 aaKnown RBP15.79■□□□□ 0.12
PTCD3-210ENST00000473829 DOCK11Q5JSL3 2073 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 LOC105371242A0A075B767 164 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 A6NIN4 97 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 TMEM210A6NLX4 147 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 SNTNA6NMZ2 147 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 TNFRSF13BO14836 293 aaPredicted RBP15.79■□□□□ 0.12
PTCD3-210ENST00000473829 ADARB1P78563 741 aaKnown RBP15.79■□□□□ 0.12
PTCD3-210ENST00000473829 PAX2Q02962 417 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 CEACAM21Q3KPI0 293 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 FAM76BQ5HYJ3 339 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 PLCXD3Q63HM9 321 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 TMEM42Q69YG0 159 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 ZNF841Q6ZN19 808 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 KCTD8Q6ZWB6 473 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 MOB3CQ70IA8 216 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 DOK3Q7L591 496 aa15.79■□□□□ 0.12
PTCD3-210ENST00000473829 ACBD7Q8N6N7 88 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms