RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 TRBV6-7A0A0A0MS04 114 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 F8VVB4 439 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 F8VWA3 439 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 HTR3BO95264 441 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 IGHG1P01857 330 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 ACAA1P09110 424 aaPredicted RBP9.63□□□□□ -0.87
C9orf3-214ENST00000473778 QDPRP09417 244 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 ZNF806P0C7X5 589 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 SMIM6P0DI80 62 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 HIST3H3Q16695 136 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 TMEM128Q5BJH2 165 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 TMEM200AQ86VY9 491 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 ARMC10Q8N2F6 343 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 INO80EQ8NBZ0 244 aaPredicted RBP9.63□□□□□ -0.87
C9orf3-214ENST00000473778 OR51F2Q8NH61 342 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 DCUN1D4Q92564 292 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 OR10C1Q96KK4 312 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 SPSB2Q99619 263 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 NUDT16L1Q9BRJ7 211 aaKnown RBP9.63□□□□□ -0.87
C9orf3-214ENST00000473778 TMEM59Q9BXS4 323 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 SRPK3Q9UPE1 567 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 FRYQ5TBA9 3013 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 A0A0B4J2A0 478 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 A0A1W2PQM1 296 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 CEACAM18A8MTB9 384 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 FGF16O43320 207 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 MBTPS2O43462 519 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 CRTAPO75718 401 aaPredicted RBP9.63□□□□□ -0.87
C9orf3-214ENST00000473778 DKK1O94907 266 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 S100A9P06702 114 aaKnown RBP9.63□□□□□ -0.87
C9orf3-214ENST00000473778 CELA2AP08217 269 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 HCKP08631 526 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 RPS2P15880 293 aaKnown RBP9.63□□□□□ -0.87
C9orf3-214ENST00000473778 GSK3AP49840 483 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 PRAMEF20Q5VT98 475 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 ZNF385CQ66K41 422 aaPredicted RBP9.63□□□□□ -0.87
C9orf3-214ENST00000473778 HAGHLQ6PII5 290 aaPredicted RBP9.63□□□□□ -0.87
C9orf3-214ENST00000473778 PGAP1Q75T13 922 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 SLC16A13Q7RTY0 426 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 OR2M3Q8NG83 312 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 OR13G1Q8NGZ3 307 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 TMED6Q8WW62 240 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 METTL7AQ9H8H3 244 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 SHPKQ9UHJ6 478 aa9.63□□□□□ -0.87
C9orf3-214ENST00000473778 IGKV1D-8A0A087WSZ0 117 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 IGLV3-32A0A0A0MS00 114 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 TEX13DA0A0J9YY54 714 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-214ENST00000473778 FOXI3A8MTJ6 420 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-214ENST00000473778 MSTNO14793 375 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 BCAT2O15382 392 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-214ENST00000473778 ATG12O94817 140 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 F12P00748 615 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-214ENST00000473778 SELLP14151 372 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 CCL1P22362 96 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 RFC3P40938 356 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 DHPSP49366 369 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-214ENST00000473778 SGCAQ16586 387 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 RSPO1Q2MKA7 263 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-214ENST00000473778 TMEM176BQ3YBM2 270 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-214ENST00000473778 PLEKHN1Q494U1 663 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-214ENST00000473778 VAX1Q5SQQ9 334 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 GUSBP11Q6P575 273 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 DRAM2Q6UX65 266 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 PEG10Q86TG7 708 aaKnown RBP9.62□□□□□ -0.87
C9orf3-214ENST00000473778 LHFPL1Q86WI0 220 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 KMT5CQ86Y97 462 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 PUSL1Q8N0Z8 303 aaKnown RBP9.62□□□□□ -0.87
C9orf3-214ENST00000473778 OR4A4PQ8NGN8 299 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 OR2AJ1Q8NGZ0 328 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 OR14K1Q8NGZ2 314 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 NMES1Q9C002 83 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 PISDQ9UG56 409 aa9.62□□□□□ -0.87
C9orf3-214ENST00000473778 PMS2P1A4D2B8 440 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 SCRG1O75711 98 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 CHRM2P08172 466 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 GSTP1P09211 210 aaKnown RBP9.61□□□□□ -0.87
C9orf3-214ENST00000473778 FAM157CP0CG43 387 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 TBPP20226 339 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 PVALBP20472 110 aaPredicted RBP9.61□□□□□ -0.87
C9orf3-214ENST00000473778 GLRA1P23415 457 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 UBE2V2Q15819 145 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 TMEM88Q6PEY1 159 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 CPEB2Q7Z5Q1 589 aaKnown RBP9.61□□□□□ -0.87
C9orf3-214ENST00000473778 TMEM17Q86X19 198 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 PNLDC1Q8NA58 520 aaKnown RBP9.61□□□□□ -0.87
C9orf3-214ENST00000473778 OR6X1Q8NH79 312 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 KCNG3Q8TAE7 436 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 STOML3Q8TAV4 291 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 PAQR8Q8TEZ7 354 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 RASL10BQ96S79 203 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 OCSTAMPQ9BR26 566 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 ST6GALNAC5Q9BVH7 336 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 FSCN3Q9NQT6 498 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 TMEM100Q9NV29 134 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 ZNF581Q9P0T4 197 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 LY6G6EA0A0G2JKS1 128 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 TMEM218A2RU14 115 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 SFT2D2O95562 160 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 IGFBP4P22692 258 aa9.61□□□□□ -0.87
C9orf3-214ENST00000473778 KCNJ3P48549 501 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms