RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SMAD4Q13485 552 aaKnown RBP18.6■□□□□ 0.57
COL18A1-207ENST00000473212 FOXRED2Q8IWF2 684 aa18.6■□□□□ 0.57
COL18A1-207ENST00000473212 OR56B1Q8NGI3 324 aa18.6■□□□□ 0.57
COL18A1-207ENST00000473212 LIN37Q96GY3 246 aaPredicted RBP18.6■□□□□ 0.57
COL18A1-207ENST00000473212 OR5B2Q96R09 309 aa18.6■□□□□ 0.57
COL18A1-207ENST00000473212 WDR77Q9BQA1 342 aaPredicted RBP18.6■□□□□ 0.57
COL18A1-207ENST00000473212 SLC5A7Q9GZV3 580 aa18.6■□□□□ 0.57
COL18A1-207ENST00000473212 ESRP2Q9H6T0 727 aaKnown RBP18.6■□□□□ 0.57
COL18A1-207ENST00000473212 MOB1AQ9H8S9 216 aa18.6■□□□□ 0.57
COL18A1-207ENST00000473212 ACKR4Q9NPB9 350 aa18.6■□□□□ 0.57
COL18A1-207ENST00000473212 GDF9O60383 454 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 OR2J2O76002 312 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 HOXB5P09067 269 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 PGA4P0DJD7 388 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 PGA3P0DJD8 388 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 P2RY4P51582 365 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 PLPPR5Q32ZL2 321 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 ZNF528Q3MIS6 628 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 C1QL2Q7Z5L3 287 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 UEVLDQ8IX04 471 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 ADAMTS17Q8TE56 1095 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 C2orf50Q96LR7 162 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 GABREP78334 506 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 FAM57BQ71RH2 274 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 LHFPL1Q86WI0 220 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 POC1AQ8NBT0 407 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 NRIP2Q9BQI9 281 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 ZFP57Q9NU63 452 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 ADAMTS9Q9P2N4 1935 aa18.59■□□□□ 0.57
COL18A1-207ENST00000473212 IGKV1-9A0A0C4DH69 117 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 A0A1W2PNV4 684 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 TRAF3IP2O43734 574 aaPredicted RBP18.58■□□□□ 0.57
COL18A1-207ENST00000473212 LRP3O75074 770 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 GLB1P16278 677 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 IGFBP4P22692 258 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 CSNK2A1P68400 391 aaPredicted RBP18.58■□□□□ 0.57
COL18A1-207ENST00000473212 RPL7L1Q6DKI1 246 aaKnown RBP18.58■□□□□ 0.57
COL18A1-207ENST00000473212 Q7L0L9 218 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 CSNK2A3Q8NEV1 391 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 NOXO1Q8NFA2 376 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 OR51T1Q8NGJ9 327 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 SCGB3A2Q96PL1 93 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 EHFQ9NZC4 300 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 RCC2Q9P258 522 aaKnown RBP18.58■□□□□ 0.57
COL18A1-207ENST00000473212 OSGIN2Q9Y236 505 aa18.58■□□□□ 0.57
COL18A1-207ENST00000473212 RCC1P18754 421 aaPredicted RBP18.58■□□□□ 0.56
COL18A1-207ENST00000473212 SNU13P55769 128 aaKnown RBP18.58■□□□□ 0.56
COL18A1-207ENST00000473212 PDZK1IP1Q13113 114 aa18.58■□□□□ 0.56
COL18A1-207ENST00000473212 PRAMEF20Q5VT98 475 aa18.58■□□□□ 0.56
COL18A1-207ENST00000473212 URM1Q9BTM9 101 aaKnown RBP18.58■□□□□ 0.56
COL18A1-207ENST00000473212 OR10A2Q9H208 303 aa18.58■□□□□ 0.56
COL18A1-207ENST00000473212 MTCH2Q9Y6C9 303 aa18.58■□□□□ 0.56
COL18A1-207ENST00000473212 IGHG1P01857 330 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 SFTPBP07988 381 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 RPS2P15880 293 aaKnown RBP18.57■□□□□ 0.56
COL18A1-207ENST00000473212 LPAR6P43657 344 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 ZNF41P51814 821 aaPredicted RBP18.57■□□□□ 0.56
COL18A1-207ENST00000473212 NKAIN1Q4KMZ8 207 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 C2CD4CQ8TF44 421 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 SMIM8Q96KF7 97 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 OR6C1Q96RD1 312 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 C12orf57Q99622 126 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 CMSS1Q9BQ75 279 aaKnown RBP18.57■□□□□ 0.56
COL18A1-207ENST00000473212 FANCFQ9NPI8 374 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 PNRC2Q9NPJ4 139 aaKnown RBP18.57■□□□□ 0.56
COL18A1-207ENST00000473212 KNG1P01042 644 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 CRYBA1P05813 215 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 SPP1P10451 314 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 NME2P22392 152 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 CAV2P51636 162 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 SUMO3P55854 103 aaPredicted RBP18.57■□□□□ 0.56
COL18A1-207ENST00000473212 CTAG1AP78358 180 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 RHBDD2Q6NTF9 364 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 ZNF283Q8N7M2 679 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 RXFP4Q8TDU9 374 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 ZNF775Q96BV0 537 aaPredicted RBP18.57■□□□□ 0.56
COL18A1-207ENST00000473212 ZNF576Q9H609 170 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 METTL7AQ9H8H3 244 aa18.57■□□□□ 0.56
COL18A1-207ENST00000473212 CACNA1EQ15878 2313 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 AGPAT2O15120 278 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 MED6O75586 246 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 SERPINA5P05154 406 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 ZFP82Q8N141 532 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 SAT2Q96F10 170 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-207ENST00000473212 TAF9BQ9HBM6 251 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 PISDQ9UG56 409 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 QDPRP09417 244 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 SRFP11831 508 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 CBX5P45973 191 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 IL15RAQ13261 267 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 GALNTL5Q7Z4T8 443 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 BIN3Q9NQY0 253 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 WIF1Q9Y5W5 379 aa18.56■□□□□ 0.56
COL18A1-207ENST00000473212 PMS2P1A4D2B8 440 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 CELA2AP08217 269 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 PET100P0DJ07 73 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 PRSS12P56730 875 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 CRIP3Q6Q6R5 217 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 GLYATL2Q8WU03 294 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 DNAJB11Q9UBS4 358 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms