RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 NGFP01138 241 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 CELA3BP08861 270 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 CECR9P0C854 216 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 ZNF35P13682 527 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 RAC2P15153 192 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 CHRNB4P30926 498 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 MNDAP41218 407 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 RBP2P50120 134 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 UCP2P55851 309 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 CLDN12P56749 244 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 MRPS10P82664 201 aaKnown RBP11.06□□□□□ -0.64
VPS13D-205ENST00000473099 TNK1Q13470 666 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 P2RY14Q15391 338 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 KISS1Q15726 138 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 UBE2V2Q15819 145 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 ZNF79Q15937 498 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 C2orf76Q3KRA6 126 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 PYDC2Q56P42 97 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 RFPL4BQ6ZWI9 263 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 OR2W3Q7Z3T1 314 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 ZNF101Q8IZC7 436 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 CMTM4Q8IZR5 234 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 PAQR4Q8N4S7 273 aaPredicted RBP11.06□□□□□ -0.64
VPS13D-205ENST00000473099 OR4M1Q8NGD0 313 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 OR56B2PQ8NGI1 322 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 UBASH3BQ8TF42 649 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 PHF21AQ96BD5 680 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 BORCS8Q96FH0 119 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 PPP1R3EQ9H7J1 279 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 CNTD2Q9H8S5 307 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 DIABLOQ9NR28 239 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 OSGIN2Q9Y236 505 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 NOP16Q9Y3C1 178 aaKnown RBP11.06□□□□□ -0.64
VPS13D-205ENST00000473099 MPC1Q9Y5U8 109 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 CADP27708 2225 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 IGHV2OR16-5A0A0B4J2B6 119 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 IGHV1-18A0A0C4DH31 117 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 A0A1B0GUH1 482 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 METTL21EPA6NDL7 271 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 ANKRD30BLA7E2S9 258 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 CD300LBA8K4G0 201 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 CTDSPLO15194 276 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 C1QL1O75973 258 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 AGFG2O95081 481 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 ATP1B3P54709 279 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 DEFA1P59665 94 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 DEFA3P59666 94 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 TAB1Q15750 504 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 FBXL19-AS1Q494R0 122 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 HACD4Q5VWC8 232 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 PLCXD3Q63HM9 321 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 AWAT2Q6E213 333 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 RAB12Q6IQ22 244 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 MYPOPQ86VE0 399 aaPredicted RBP11.05□□□□□ -0.64
VPS13D-205ENST00000473099 OR8H2Q8N162 312 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 OR4D6Q8NGJ1 314 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 OR1J1Q8NGS3 322 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 KCNG3Q8TAE7 436 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 PIGCQ92535 297 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 SLC25A38Q96DW6 304 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 S100A13Q99584 98 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 NGBQ9NPG2 151 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 GPR173Q9NS66 373 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 RAB22AQ9UL26 194 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 MRPS28Q9Y2Q9 187 aaKnown RBP11.05□□□□□ -0.64
VPS13D-205ENST00000473099 RHBDD3Q9Y3P4 386 aa11.05□□□□□ -0.64
VPS13D-205ENST00000473099 ZNF462Q96JM2 2506 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 HIVEP3Q5T1R4 2406 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 TMEM272A0A1B0GTI8 110 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 LDLRAD4O15165 306 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 CRYAAP02489 173 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 MMP15P51511 669 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 RPS23P62266 143 aaKnown RBP11.04□□□□□ -0.64
VPS13D-205ENST00000473099 NAAAQ02083 359 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 SCN1BQ07699 218 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 FAM27E3Q08E93 113 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 GPR176Q14439 515 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 RGS21Q2M5E4 152 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 ZNF718Q3SXZ3 478 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 SEZ6L2Q6UXD5 910 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 MOB3CQ70IA8 216 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 CDH24Q86UP0 819 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 ANGPTL5Q86XS5 388 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 LIX1LQ8IVB5 337 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 ZDHHC23Q8IYP9 409 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 Q8N402 240 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 ZNF843Q8N446 348 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 MINDY2Q8NBR6 621 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 SETD6Q8TBK2 473 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 HIST1H2AAQ96QV6 131 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 SDHCQ99643 169 aaPredicted RBP11.04□□□□□ -0.64
VPS13D-205ENST00000473099 NUDT16L1Q9BRJ7 211 aaKnown RBP11.04□□□□□ -0.64
VPS13D-205ENST00000473099 PAPOLGQ9BWT3 736 aaKnown RBP11.04□□□□□ -0.64
VPS13D-205ENST00000473099 CST11Q9H112 138 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 PCDHB16Q9NRJ7 776 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 ABCB10Q9NRK6 738 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 MRPL15Q9P015 296 aaKnown RBP11.04□□□□□ -0.64
VPS13D-205ENST00000473099 PLCE1Q9P212 2302 aa11.04□□□□□ -0.64
VPS13D-205ENST00000473099 SETXQ7Z333 2677 aaKnown RBP11.03□□□□□ -0.64
VPS13D-205ENST00000473099 SPENQ96T58 3664 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms