RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ZNF256Q9Y2P7 627 aaPredicted RBP11.99□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PRRT4C9JH25 899 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 LINC01565O15544 149 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ECI1P42126 302 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PFN3P60673 137 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 LHX4Q969G2 390 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ACTR3CQ9C0K3 210 aaPredicted RBP11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 DOK5Q9P104 306 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PCNX1Q96RV3 2341 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CLEC18AA5D8T8 446 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 NEURL1O76050 574 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MGPP08493 103 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PIGPP57054 158 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CLEC18CQ8NCF0 446 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 IP6K3Q96PC2 410 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MKRN2Q9H000 416 aaKnown RBP11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SYT5O00445 386 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SMAGPQ0VAQ4 97 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SMIM21Q3B7S5 101 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CYS1Q717R9 158 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 OR10Z1Q8NGY1 313 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 WDR61Q9GZS3 305 aaKnown RBP11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ETV7Q9Y603 341 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 KPTNQ9Y664 436 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 GFYI3L273 518 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ATXN7O15265 892 aaPredicted RBP11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 LGALS7P47929 136 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CST9Q5W186 159 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PRDM14Q9GZV8 571 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 IGKV6D-21A0A0A0MT36 114 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 H7C2G1 150 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TMEM189-UBE2V1I3L0A0 370 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ANKRD34CP0C6C1 535 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SIX1Q15475 284 aaPredicted RBP11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ARL6IP6Q8N6S5 226 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 GNRHR2Q96P88 292 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 DOT1LQ8TEK3 1739 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TAPBPO15533 448 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CRYABP02511 175 aaKnown RBP11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CLEC2LP0C7M8 214 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 HRH1P35367 487 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF121P58317 390 aaPredicted RBP11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 HERVK_113P61574 105 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SRSF9Q13242 221 aaKnown RBP eCLIP11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 LYG1Q8N1E2 194 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TMEM147Q9BVK8 224 aa11.98□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 H3BMH7 237 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SOD1P00441 154 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 C19orf57Q0VDD7 668 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 IHHQ14623 411 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TCTN3Q6NUS6 607 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CELF2-AS1Q8N7Q2 184 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 RFESDQ8TAC1 157 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 LINC00052Q96N35 136 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 THAP10Q9P2Z0 257 aaPredicted RBP11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 S100A8P05109 93 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ALPLP05186 524 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 S100A11P31949 105 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 AGERQ15109 404 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF766Q5HY98 468 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SFRP2Q96HF1 295 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 C1QTNF3Q9BXJ4 246 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 LRP3O75074 770 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SLC35B4Q969S0 331 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 DUS3LQ96G46 650 aaKnown RBP11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 UMAD1C9J7I0 102 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SCG5P05408 212 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SRFP11831 508 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SLC36A1Q7Z2H8 476 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF738Q8NE65 137 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 WASHC3Q9Y3C0 194 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 A0A1B0GTQ1 180 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 FABP4P15090 132 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PAX5Q02548 391 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SPRED1Q7Z699 444 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ACACAQ13085 2346 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 OR3A4PP47883 348 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF534Q76KX8 674 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CLDN22Q8N7P3 220 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 FSCN3Q9NQT6 498 aa11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SPTAN1Q13813 2472 aaKnown RBP11.97□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ID1P41134 155 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 WNT5AP41221 380 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MICBQ29980 383 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 WIPI1Q5MNZ9 446 aaPredicted RBP11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 OR1N2Q8NGR9 330 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PCOLCE2Q9UKZ9 415 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 EMCNQ9ULC0 261 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TDRD15B5MCY1 1934 aaKnown RBP11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 NUP188Q5SRE5 1749 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 A0A1W2PR48 441 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MPDU1O75352 247 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 UBL3O95164 117 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZNF154Q13106 437 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SMAD4Q13485 552 aaKnown RBP11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 FCN2Q15485 313 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 HLA-BQ31612 363 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ARRDC2Q8TBH0 407 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms